RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GABRA1P14867 456 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 PTBP1P26599 531 aaKnown RBP eCLIP8.25□□□□□ -1.097e-7■■■■■ 38.5
VAPB-201ENST00000265619 LIMS1P48059 325 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 VEGFCP49767 419 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 CAMK1Q14012 370 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 ZNF613Q6PF04 617 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 CD300LGQ6UXG3 332 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 NPAS4Q8IUM7 802 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 IZUMO1Q8IYV9 350 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 C12orf45Q8N5I9 185 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 ARIH2OSQ8N7S6 290 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 GPR156Q8NFN8 814 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 OR51Q1Q8NH59 317 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 HMCESQ96FZ2 354 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 TMEM106CQ9BVX2 250 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 JAM3Q9BX67 310 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 OSGEPL1Q9H4B0 414 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 EQTNQ9NQ60 294 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 WBP1LQ9NX94 342 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 TVP23BQ9NYZ1 205 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 NUBP2Q9Y5Y2 271 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 ABHD14A-ACY1A0A1B0GW23 586 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 MAGEB17A8MXT2 336 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 GPR37O15354 613 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 GALTP07902 379 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 ETFAP13804 333 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 NFYAP23511 347 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 RAD52P43351 418 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 SELENOWP63302 87 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 ACVR1Q04771 509 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 GPNMBQ14956 572 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 ZNF697Q5TEC3 545 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 ZNF770Q6IQ21 691 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 HAGHLQ6PII5 290 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 METAP1DQ6UB28 335 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 TMUB2Q71RG4 321 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 SAMD12Q8N8I0 201 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 PLA2G15Q8NCC3 412 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 GPR26Q8NDV2 337 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 OR1M1Q8NGA1 313 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 PSMG2Q969U7 264 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 TADA1Q96BN2 335 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 FCRL1Q96LA6 429 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 APOLD1Q96LR9 279 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 TPT1P8Q9HAU6 139 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 MYEF2Q9P2K5 600 aaKnown RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 OR10H1Q9Y4A9 318 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 HELZP42694 1942 aaKnown RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 OR6C74A6NCV1 312 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 GABRPO00591 440 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 EOMESO95936 686 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 UCHL1P09936 223 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 LAMP1P11279 417 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 PVALBP20472 110 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 NFYBP25208 207 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 GNALP38405 381 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 UBE2MP61081 183 aaKnown RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 SNTB1Q13884 538 aaKnown RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 GINS1Q14691 196 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 FAAP20Q6NZ36 180 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 RTL10Q7L3V2 364 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 OR4K2Q8NGD2 314 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 STK35Q8TDR2 534 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 FCRL2Q96LA5 508 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 ZNF285Q96NJ3 590 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 PKP4Q99569 1192 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 CINPQ9BW66 212 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 APOL5Q9BWW9 433 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 OR10A4Q9H209 315 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 AUNIPQ9H7T9 357 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 BARX1Q9HBU1 254 aaPredicted RBP8.25□□□□□ -1.09
VAPB-201ENST00000265619 GKN1Q9NS71 199 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 OSER1Q9NX31 292 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 MGAT4CQ9UBM8 478 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 RPS6KB2Q9UBS0 482 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 ACSL6Q9UKU0 697 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 GPR52Q9Y2T5 361 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 DSPPQ9NZW4 1301 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 FAM170BA6NMN3 283 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 H3BN98 237 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 RASGRP1O95267 797 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 MUC1P15941 1255 aaPredicted RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 EPORP19235 508 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 ACVRL1P37023 503 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 SRSF3P84103 164 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 ALKBH1Q13686 389 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 PRAMEF13Q5VWM6 474 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 DEF8Q6ZN54 512 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 C16orf59Q7L2K0 433 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 LRRTM4Q86VH4 590 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 PDZD9Q8IXQ8 264 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 OR11G2Q8NGC1 345 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 OR52B4Q8NGK2 314 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 EXOSC8Q96B26 276 aaKnown RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 C11orf24Q96F05 449 aaPredicted RBP8.24□□□□□ -1.09
VAPB-201ENST00000265619 RHOVQ96L33 236 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 ZFP3Q96NJ6 502 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 CASD1Q96PB1 797 aa8.24□□□□□ -1.09
VAPB-201ENST00000265619 ARL6Q9H0F7 186 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms