RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 POU6F2P78424 691 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-201ENST00000265304 FUT5Q11128 374 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 EFR3AQ14156 821 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 DECR1Q16698 335 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 SPATS1Q496A3 300 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.13□□□□□ -0.31
SSBP1-201ENST00000265304 DNAJC14Q6Y2X3 702 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-201ENST00000265304 BNC2Q6ZN30 1099 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-201ENST00000265304 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-201ENST00000265304 SLC15A3Q8IY34 581 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 GPR151Q8TDV0 419 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 SLC9A6Q92581 669 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 OMA1Q96E52 524 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 SCMH1Q96GD3 660 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 COL21A1Q96P44 957 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 UTP23Q9BRU9 249 aaKnown RBP13.13□□□□□ -0.31
SSBP1-201ENST00000265304 G6PC3Q9BUM1 346 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 ZNF350Q9GZX5 532 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 BCL2L10Q9HD36 194 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 A4GALTQ9NPC4 353 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 EXD2Q9NVH0 621 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 CNIH4Q9P003 139 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-201ENST00000265304 MRTO4Q9UKD2 239 aaKnown RBP13.13□□□□□ -0.31
SSBP1-201ENST00000265304 ZNF407Q9C0G0 2248 aa13.13□□□□□ -0.31
SSBP1-201ENST00000265304 FADS1O60427 444 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 CBX6O95503 412 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 ESRRAP11474 423 aaPredicted RBP13.12□□□□□ -0.31
SSBP1-201ENST00000265304 ETFAP13804 333 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 RBBP4Q09028 425 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 BNIP1Q12981 228 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 SNTA1Q13424 505 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 FXNQ16595 210 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 RPUSD3Q6P087 351 aaKnown RBP13.12□□□□□ -0.31
SSBP1-201ENST00000265304 LRRC74BQ6ZQY2 392 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 RTL4Q6ZR62 310 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 LINC00696Q6ZRV3 163 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 TMEM156Q8N614 296 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 RBMXL3Q8N7X1 1067 aaKnown RBP13.12□□□□□ -0.31
SSBP1-201ENST00000265304 COX18Q8N8Q8 333 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 OR5D16Q8NGK9 328 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 FBXO27Q8NI29 283 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 C9orf43Q8TAL5 461 aaPredicted RBP13.12□□□□□ -0.31
SSBP1-201ENST00000265304 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 ASB15Q8WXK1 588 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 PIK3R3Q92569 461 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 CDS1Q92903 461 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 TMEM125Q96AQ2 219 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 ZNF583Q96ND8 569 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 YIPF4Q9BSR8 244 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 IL1RL2Q9HB29 575 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 PROK2Q9HC23 129 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 NDE1Q9NXR1 346 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 CNOT11Q9UKZ1 510 aaKnown RBP13.12□□□□□ -0.31
SSBP1-201ENST00000265304 PCDHGA10Q9Y5H3 936 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 POLEQ07864 2286 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 DSPPQ9NZW4 1301 aa13.12□□□□□ -0.31
SSBP1-201ENST00000265304 DPM1O60762 260 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 UGT2B11O75310 529 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 UBOX5O94941 541 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 ZIC2O95409 532 aaPredicted RBP13.11□□□□□ -0.31
SSBP1-201ENST00000265304 FAM87AP0C7U9 286 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 ARAFP10398 606 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 TBXA2RP21731 343 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 CD97P48960 835 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 DSTNP60981 165 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 PLCXD2Q0VAA5 305 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 ART3Q13508 389 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 RAPSNQ13702 412 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 SELPLGQ14242 412 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 CAPRIN1Q14444 709 aaKnown RBP13.11□□□□□ -0.31
SSBP1-201ENST00000265304 RABL3Q5HYI8 236 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 DCST2Q5T1A1 773 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 ATAD3BQ5T9A4 648 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 TNFAIP8L2Q6P589 184 aaPredicted RBP13.11□□□□□ -0.31
SSBP1-201ENST00000265304 SZRD1Q7Z422 152 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 PTOV1Q86YD1 416 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 PGAM4Q8N0Y7 254 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 ZADH2Q8N4Q0 377 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 SPPL2AQ8TCT8 520 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 XAGE5Q8WWM1 108 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 RAB8BQ92930 207 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 SLC39A3Q9BRY0 314 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 HOXD1Q9GZZ0 328 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 SLC38A1Q9H2H9 487 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 FBXO34Q9NWN3 711 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 HPF1Q9NWY4 346 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 CMTM6Q9NX76 183 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 TAS2R1Q9NYW7 299 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 PLA2G3Q9NZ20 509 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.11□□□□□ -0.31
SSBP1-201ENST00000265304 ABCG2Q9UNQ0 655 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 TP53TG5Q9Y2B4 290 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 OR10H1Q9Y4A9 318 aa13.11□□□□□ -0.31
SSBP1-201ENST00000265304 TRAV17A0A0B4J275 112 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 A0A1W2PQD3 144 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms