RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PAGE3Q5JUK9 113 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 SLC22A10Q63ZE4 541 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 PAPD5Q8NDF8 572 aaKnown RBP17.05■□□□□ 0.32
COL5A3-201ENST00000264828 ZMYND19Q96E35 227 aaPredicted RBP17.05■□□□□ 0.32
COL5A3-201ENST00000264828 PAAF1Q9BRP4 392 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 A0A0U1RQS6 177 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 PHYHO14832 338 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 SYT7O43581 403 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 VEGFDO43915 354 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 C6P13671 934 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 RAC2P15153 192 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 THBS2P35442 1172 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 ARHGAP12Q8IWW6 846 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 CYB561A3Q8NBI2 242 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 ACBD4Q8NC06 268 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 OR56B2PQ8NGI1 322 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 IGSF21Q96ID5 467 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 RPS10P5Q9NQ39 176 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 YY2O15391 372 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 SLC22A5O76082 557 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 CAV2P51636 162 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 ZNF136P52737 540 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 ACTBP60709 375 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 ACTG1P63261 375 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 PTERQ96BW5 349 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 GPR174Q9BXC1 333 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 ACOT13Q9NPJ3 140 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 KCMF1Q9P0J7 381 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 CACNG2Q9Y698 323 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 SHOXO15266 292 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 CDK5R2Q13319 367 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 DEFB110Q30KQ9 67 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 COMMD6Q7Z4G1 85 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 SERPINA12Q8IW75 414 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 RRNAD1Q96FB5 475 aaKnown RBP17.05■□□□□ 0.32
COL5A3-201ENST00000264828 GPR62Q9BZJ7 368 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 SLA2Q9H6Q3 261 aa17.05■□□□□ 0.32
COL5A3-201ENST00000264828 OR2T4Q8NH00 348 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 OR51E2Q9H255 320 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 MEPEQ9NQ76 525 aaPredicted RBP17.04■□□□□ 0.32
COL5A3-201ENST00000264828 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 LIPCP11150 499 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 KIAA0319Q5VV43 1072 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 C12orf76Q8N812 135 aaPredicted RBP17.04■□□□□ 0.32
COL5A3-201ENST00000264828 C16orf70Q9BSU1 422 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 TMEM45AQ9NWC5 275 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 NAALAD2Q9Y3Q0 740 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 G3V2L1 256 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 CASC3O15234 703 aaKnown RBP17.04■□□□□ 0.32
COL5A3-201ENST00000264828 DDIT4LQ96D03 193 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 SAMD11Q96NU1 681 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 ARHGAP9Q9BRR9 750 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 KCNIP1Q9NZI2 227 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 CSNK1G3Q9Y6M4 447 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 JUNDP17535 347 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 HRH2P25021 359 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 NDUFAF5Q5TEU4 345 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 TAS2R8Q9NYW2 309 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 TMEM181Q9P2C4 612 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 UGT2B7P16662 529 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 LETMD1Q6P1Q0 360 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 MS4A15Q8N5U1 240 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 GDPD1Q8N9F7 314 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 FRZBQ92765 325 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 FTSJ1Q9UET6 329 aa17.04■□□□□ 0.32
COL5A3-201ENST00000264828 KRBA1A5PL33 1030 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 STC2O76061 302 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ETV5P41161 510 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 FOXA1P55317 472 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 PIN1Q13526 163 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 USP53Q70EK8 1073 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ISCA2Q86U28 154 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 IL17RCQ8NAC3 791 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 MALSU1Q96EH3 234 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ZNF486Q96H40 463 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 IRS2Q9Y4H2 1338 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 C4BP0C0L5 1744 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ZNF705FA8MVS1 300 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ZNF705DP0CH99 300 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ZNF705BP0CI00 300 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 BMP2P12643 396 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 KBTBD6Q86V97 674 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 FAM71F1Q96KD3 344 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 TEPSINQ96N21 525 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 DCDC2BA2VCK2 349 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 PRICKLE3O43900 615 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 JRKO75564 520 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 BDKRB2P30411 391 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 RORAP35398 523 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 TMEM35AQ53FP2 167 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 MAMDC2Q7Z304 686 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 GPR149Q86SP6 731 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 PM20D2Q8IYS1 436 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 RADILQ96JH8 1075 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ACTRT3Q9BYD9 372 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 RDH14Q9HBH5 336 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 A6NIN4 97 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 IFNA10P01566 189 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 BCL2A1Q16548 175 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms