RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 A0A0B4J203 849 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 IQCMA0A1B0GVH7 501 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 MID1O15344 667 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 PRODHO43272 600 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 UBXN7O94888 489 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 LGI1O95970 557 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 IL1AP01583 271 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 CHRNB1P11230 501 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ITGB7P26010 798 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 PPM1AP35813 382 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 EPHA5P54756 1037 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 BTN3A2P78410 334 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 GPLD1P80108 840 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 CDK5Q00535 292 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 TEKQ02763 1124 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SLC3A1Q07837 685 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 TGM3Q08188 693 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 AGERQ15109 404 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 TOR1AIP1Q5JTV8 583 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 TMEM201Q5SNT2 666 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ZC3H14Q6PJT7 736 aaKnown RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 ERN2Q76MJ5 926 aaKnown RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 SIRT6Q8N6T7 355 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 CYB561A3Q8NBI2 242 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 TRIM43Q96BQ3 446 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 OR7D2Q96RA2 312 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SLX1AQ9BQ83 275 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 IRF2BPLQ9H1B7 796 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 PPIL3Q9H2H8 161 aaKnown RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 DPEP2Q9H4A9 486 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 CCDC86Q9H6F5 360 aaKnown RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 SIRT4Q9Y6E7 314 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 LRRK1Q38SD2 2015 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 TSPAN11A1L157 253 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 GTPBP1O00178 669 aaKnown RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 GABRPO00591 440 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 CLUP10909 449 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 PRG2P13727 222 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 MYOGP15173 224 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 EVI2BP34910 448 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ACVR1BP36896 505 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 DDOSTP39656 456 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 MAP2K3P46734 347 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 HCCSP53701 268 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 GAS1P54826 345 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SMIM11AP58511 58 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 GALK2Q01415 458 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 PCDH1Q08174 1060 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 BTBD16Q32M84 506 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 HNRNPA1L2Q32P51 320 aaKnown RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 KLHL22Q53GT1 634 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ENTPD8Q5MY95 495 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ARL9Q6T311 187 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 NUP43Q8NFH3 380 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 OR10H4Q8NGA5 316 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 OR51L1Q8NGJ5 315 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SUN3Q8TAQ9 357 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SUSD6Q92537 303 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SLC38A2Q96QD8 506 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 HCAR1Q9BXC0 346 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 DPH1Q9BZG8 443 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 ATP13A2Q9NQ11 1180 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 WSB2Q9NYS7 404 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 H2AFY2Q9P0M6 372 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 TBX21Q9UL17 535 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ENTPD4Q9Y227 616 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SF3B6Q9Y3B4 125 aaKnown RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 GRIP1Q9Y3R0 1128 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 HSPB11Q9Y547 144 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 INSL6Q9Y581 213 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 MN1Q10571 1320 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 KIAA1671Q9BY89 1806 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ABHD14A-ACY1A0A1B0GW23 586 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ARRDC5A6NEK1 342 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 MAN2B1O00754 1011 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ZIC2O95409 532 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 PRKCAP17252 672 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 CPN2P22792 545 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SEC13P55735 322 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SIM1P81133 766 aaPredicted RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 EFR3AQ14156 821 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 NDUFA5Q16718 116 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 C1orf94Q6P1W5 598 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ANKRD33Q7Z3H0 272 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 ADGRD2Q7Z7M1 963 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 NR2C2APQ86WQ0 139 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 MRPL43Q8N983 215 aaKnown RBP8.55□□□□□ -1.04
MSH4-201ENST00000263187 OR4E2Q8NGC2 313 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 OR13C5Q8NGS8 318 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 CDS1Q92903 461 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 RELTQ969Z4 430 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 PRRC1Q96M27 445 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 MCHR1Q99705 422 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 FAM83CQ9BQN1 747 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 FUZQ9BT04 418 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 EXTL2Q9UBQ6 330 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 FBXL4Q9UKA2 621 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 SLC7A7Q9UM01 511 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms