RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.29■□□□□ 0.042e-6■■□□□ 14.1
CHCHD3-201ENST00000262570 SH2D2AQ9NP31 389 aa15.29■□□□□ 0.04
CHCHD3-201ENST00000262570 CORO2BQ9UQ03 480 aa15.29■□□□□ 0.04
CHCHD3-201ENST00000262570 CHCHD2Q9Y6H1 151 aaPredicted RBP15.29■□□□□ 0.04
CHCHD3-201ENST00000262570 TNRC6AQ8NDV7 1962 aaKnown RBP15.29■□□□□ 0.04
CHCHD3-201ENST00000262570 ATRXP46100 2492 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 PRAMEF27A3QJZ7 478 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 SLC25A12O75746 678 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 AK1P00568 194 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 BMP2P12643 396 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 SLC6A2P23975 617 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 IL12BP29460 328 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 NUDT2P50583 147 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 MTPNP58546 118 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 DSTNP60981 165 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 ART3Q13508 389 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 ARHGAP11BQ3KRB8 267 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 CCNJQ5T5M9 372 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 DESI1Q6ICB0 168 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 C8orf82Q6P1X6 216 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 FIGNL1Q6PIW4 674 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 RTL4Q6ZR62 310 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 FAM13CQ8NE31 585 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 OR8J3Q8NGG0 315 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 OR5M3Q8NGP4 307 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 PAQR8Q8TEZ7 354 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 UBL7Q96S82 380 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 SECISBP2Q96T21 854 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 SDF2Q99470 211 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 GPATCH1Q9BRR8 931 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 THUMPD3Q9BV44 507 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 KAT8Q9H7Z6 458 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 FBXO34Q9NWN3 711 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 THUMPD1Q9NXG2 353 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 TRAV17A0A0B4J275 112 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 TP53I11O14683 189 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 TNFRSF21O75509 655 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 T-ENOLP0DO92 83 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 ESRRAP11474 423 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 RFX3P48380 749 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 FUT5Q11128 374 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 EFR3AQ14156 821 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 RABL3Q5HYI8 236 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 ATAD3BQ5T9A4 648 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 AP1ARQ63HQ0 302 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 ZAR1Q86SH2 424 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 GALNT10Q86SR1 603 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 PSD4Q8NDX1 1056 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 SH3GL1Q99961 368 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 HOPXQ9BPY8 73 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 G6PC3Q9BUM1 346 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 LIPT1Q9Y234 373 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 PCDHGB6Q9Y5F9 930 aa15.28■□□□□ 0.04
CHCHD3-201ENST00000262570 CCT8L1PA6NM43 557 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 SP1P08047 785 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 NUDT7P0C024 238 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 TFPTP0C1Z6 253 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 CCL3P10147 92 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 CYP4B1P13584 511 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 CD46P15529 392 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 CALB2P22676 271 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 LCN1P31025 176 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 MNAT1P51948 309 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 SLC22A10Q63ZE4 541 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 SLC25A25Q6KCM7 469 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 C16orf62Q7Z3J2 963 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 SPPL2AQ8TCT8 520 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 TMEM125Q96AQ2 219 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 TMCO6Q96DC7 493 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 SCMH1Q96GD3 660 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 NODALQ96S42 347 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 TIMMDC1Q9NPL8 285 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 CNIH4Q9P003 139 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 B3GNT3Q9Y2A9 372 aa15.27■□□□□ 0.03
CHCHD3-201ENST00000262570 IGSF10Q6WRI0 2623 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 FCMRO60667 390 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 STX11O75558 287 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 GUSBP08236 651 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 ZNF169Q14929 603 aaPredicted RBP15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 MAPK11Q15759 364 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 ADRM1Q16186 407 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 SYPL1Q16563 259 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 ZNF766Q5HY98 468 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 TMEM81Q6P7N7 255 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 LSM14AQ8ND56 463 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 FBXO27Q8NI29 283 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 SLC38A5Q8WUX1 472 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 RNF138Q8WVD3 245 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 TRNT1Q96Q11 434 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 MFRPQ9BY79 579 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 HES7Q9BYE0 225 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 ZNF350Q9GZX5 532 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 P2RX2Q9UBL9 471 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 CNOT11Q9UKZ1 510 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 ZFYVE26Q68DK2 2539 aa15.26■□□□□ 0.03
CHCHD3-201ENST00000262570 C15orf38-AP3S2A0A0A6YYH1 394 aa15.25■□□□□ 0.03
CHCHD3-201ENST00000262570 ANKRD33BA6NCL7 494 aa15.25■□□□□ 0.03
CHCHD3-201ENST00000262570 ATXN7O15265 892 aaPredicted RBP15.25■□□□□ 0.03
CHCHD3-201ENST00000262570 NME2P1O60361 137 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms