RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MFSD12Q6NUT3 480 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 TSSK4Q6SA08 328 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 RNF44Q7L0R7 432 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 P3H2Q8IVL5 708 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 MCATQ8IVS2 390 aaKnown RBP12.69□□□□□ -0.38
VMP1-201ENST00000262291 CA13Q8N1Q1 262 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 MFSD4AQ8N468 514 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 FAR1Q8WVX9 515 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 MSANTD3Q96H12 275 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 SLC38A3Q99624 504 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 ACTRT3Q9BYD9 372 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 SCN3BQ9NY72 215 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 GPR83Q9NYM4 423 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 TAS2R16Q9NYV7 291 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 KCND3Q9UK17 655 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 RABL2BQ9UNT1 228 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 A0A0C4DFX4 3053 aa12.69□□□□□ -0.38
VMP1-201ENST00000262291 H3BN98 237 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 IDH3BO43837 385 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 ICMTO60725 284 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 GALR3O60755 368 aaPredicted RBP12.68□□□□□ -0.38
VMP1-201ENST00000262291 UGT2B17O75795 530 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 CSF2P04141 144 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 LCKP06239 509 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 CCDC159P0C7I6 412 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 ACP2P11117 423 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 TNNI3P19429 210 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 PSMB9P28065 219 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 CNR2P34972 360 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 CTSKP43235 329 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 SLC35A2P78381 396 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 C19orf47Q8N9M1 422 aaKnown RBP12.68□□□□□ -0.38
VMP1-201ENST00000262291 BBS10Q8TAM1 723 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 FKBP10Q96AY3 582 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 FNDC11Q9BVV2 318 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 SEMA6CQ9H3T2 930 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 IMPAD1Q9NX62 359 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 CHST2Q9Y4C5 530 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 THADAQ6YHU6 1953 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 A8MVJ9 347 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 CYR61O00622 381 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 PRKNO60260 465 aaPredicted RBP12.68□□□□□ -0.38
VMP1-201ENST00000262291 KCNK2O95069 426 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 ALPPP05187 535 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 HMGA2P52926 109 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 GABARAPL2P60520 117 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
VMP1-201ENST00000262291 SNAP47Q5SQN1 464 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 FIGNL1Q6PIW4 674 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 IQCHQ86VS3 1027 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 TP53INP1Q96A56 240 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 PEX11GQ96HA9 241 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 GPA33Q99795 319 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 TWSG1Q9GZX9 223 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 TPRKBQ9Y3C4 175 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 WDFY4Q6ZS81 3184 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 LOC105371267A0A1B0GV96 52 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 FOSL2P15408 326 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 TGFBR1P36897 503 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 VBP1P61758 197 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 CEBPEQ15744 281 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 CEP78Q5JTW2 689 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 GATAD2AQ86YP4 633 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 MUL1Q969V5 352 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 TBC1D17Q9HA65 648 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 MAN2C1Q9NTJ4 1040 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 ENPP5Q9UJA9 477 aa12.68□□□□□ -0.38
VMP1-201ENST00000262291 UNC13CQ8NB66 2214 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 A8MV72 311 aaPredicted RBP12.67□□□□□ -0.38
VMP1-201ENST00000262291 HRKO00198 91 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 RGS13O14921 159 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 CHST10O43529 356 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 RGS10O43665 173 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 CRYZL1O95825 349 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 LGI1O95970 557 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 PROS1P07225 676 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 NME1P15531 152 aaKnown RBP12.67□□□□□ -0.38
VMP1-201ENST00000262291 JUNBP17275 347 aaPredicted RBP12.67□□□□□ -0.38
VMP1-201ENST00000262291 TRHRP34981 398 aaPredicted RBP12.67□□□□□ -0.38
VMP1-201ENST00000262291 MAP4K2Q12851 820 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 ELOCQ15369 112 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 FAM214AQ32MH5 1076 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 PGBD2Q6P3X8 592 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 SPATC1Q76KD6 591 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 POC5Q8NA72 575 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 ZFPM2Q8WW38 1151 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 MS4A4EQ96PG1 132 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 ROGDIQ9GZN7 287 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 DUSP21Q9H596 190 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 SOHLH2Q9NX45 425 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.67□□□□□ -0.38
VMP1-201ENST00000262291 SLC9A8Q9Y2E8 581 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 PMF1-BGLAPU3KQ54 211 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 DMDP11532 3685 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 SEC16AO15027 2179 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 A0A0G2JPF8 293 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 ZNF99A8MXY4 864 aaPredicted RBP12.67□□□□□ -0.38
VMP1-201ENST00000262291 HNRNPCL2B2RXH8 293 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 HNRNPCL3B7ZW38 293 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms