RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 OGFRL1Q5TC84 451 aaPredicted RBP12.32□□□□□ -0.44
SGCA-201ENST00000262018 NDUFAF5Q5TEU4 345 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 GARNL3Q5VVW2 1013 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 ERICH5Q6P6B1 374 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 DMRTC2Q8IXT2 367 aaPredicted RBP12.32□□□□□ -0.44
SGCA-201ENST00000262018 PRSS58Q8IYP2 241 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 TRIML2Q8N7C3 387 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 ADCY4Q8NFM4 1077 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 KLHL4Q9C0H6 718 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 LIME1Q9H400 295 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 ACSS1Q9NUB1 689 aaPredicted RBP12.32□□□□□ -0.44
SGCA-201ENST00000262018 STAB1Q9NY15 2570 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 KCNN3Q9UGI6 736 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 ST6GALNAC2Q9UJ37 374 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 A0A1W2PR48 441 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 HYKKA2RU49 373 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 OR5H15A6NDH6 313 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 NPIPA5E9PKD4 350 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 E9PLN8 166 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 BMP10O95393 424 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 ONECUT2O95948 504 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 SERPINA7P05543 415 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 ZNF888P0CJ79 500 aaPredicted RBP12.31□□□□□ -0.44
SGCA-201ENST00000262018 GCGRP47871 477 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 BTN3A2P78410 334 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 ALDH6A1Q02252 535 aaKnown RBP12.31□□□□□ -0.44
SGCA-201ENST00000262018 RGNQ15493 299 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 TRIP10Q15642 601 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 CYP51A1Q16850 503 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 ZNF766Q5HY98 468 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 CLEC9AQ6UXN8 241 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 ABHD13Q7L211 337 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 DOLPP1Q86YN1 238 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 ZZZ3Q8IYH5 903 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 METTL27Q8N6F8 245 aaPredicted RBP12.31□□□□□ -0.44
SGCA-201ENST00000262018 FIG4Q92562 907 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 SERINC2Q96SA4 455 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 DMRTA2Q96SC8 542 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 VKORC1Q9BQB6 163 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 SLC35A5Q9BS91 424 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 CUTCQ9NTM9 273 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 CES1P1Q9UKY3 287 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 ATG4BQ9Y4P1 393 aa12.31□□□□□ -0.44
SGCA-201ENST00000262018 NKX2-6A6NCS4 301 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 FAM90A27PA6NNH2 459 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 ADAM10O14672 748 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 DSCR3O14972 297 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 PROM1O43490 865 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 KRT75O95678 551 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 AIFM1O95831 613 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 CELA2AP08217 269 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 ZNF10P21506 573 aaPredicted RBP12.3□□□□□ -0.44
SGCA-201ENST00000262018 UQCRC2P22695 453 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 DNASE1P24855 282 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 PEX2P28328 305 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 OR1D4P47884 311 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 MVDP53602 400 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 NDUFA9Q16795 377 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 VMACQ2NL98 169 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 TBCELQ5QJ74 424 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 ABHD17BQ5VST6 288 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 LPCAT4Q643R3 524 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 FKBP9P1Q75LS8 142 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 NDUFAF7Q7L592 441 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 PTOV1Q86YD1 416 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 OR52N2Q8NGI0 321 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 PSMA8Q8TAA3 256 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 LRTOMTQ8WZ04 291 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 UCN3Q969E3 161 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 FAM162AQ96A26 154 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 EXOSC8Q96B26 276 aaKnown RBP12.3□□□□□ -0.44
SGCA-201ENST00000262018 ZBED6CLQ96FA7 236 aaPredicted RBP12.3□□□□□ -0.44
SGCA-201ENST00000262018 RNF32Q9H0A6 362 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 RAD21L1Q9H4I0 556 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 NEUROD4Q9HD90 331 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 SLC35C2Q9NQQ7 365 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 FBXW2Q9UKT8 454 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 PLEKHA6Q9Y2H5 1048 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 NBEAL1Q6ZS30 2694 aa12.3□□□□□ -0.44
SGCA-201ENST00000262018 VSTM2BA6NLU5 285 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 TIPRLO75663 272 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 COX6A1P12074 109 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 FCGR1AP12314 374 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 ALOX12P18054 663 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 IL1RNP18510 177 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 MANFP55145 182 aaKnown RBP12.29□□□□□ -0.44
SGCA-201ENST00000262018 SNRPNP63162 240 aaKnown RBP12.29□□□□□ -0.44
SGCA-201ENST00000262018 FADDQ13158 208 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 VEZF1Q14119 521 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 ADRM1Q16186 407 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 HMBOX1Q6NT76 420 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 TMEM214Q6NUQ4 689 aaKnown RBP12.29□□□□□ -0.44
SGCA-201ENST00000262018 SLC48A1Q6P1K1 146 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 EID3Q8N140 333 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 CLEC4FQ8N1N0 589 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 ARHGEF39Q8N4T4 335 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 FAM110BQ8TC76 370 aa12.29□□□□□ -0.44
SGCA-201ENST00000262018 ARSGQ96EG1 525 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms