RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PRAMEF9Q5VWM5 478 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM220AQ7Z4H9 259 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 POGLUT1Q8NBL1 392 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CGRRF1Q99675 332 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MGLLQ99685 303 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 URM1Q9BTM9 101 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM126AQ9BYI3 521 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 POMKQ9H5K3 350 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 AMBNQ9NP70 447 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 IMP3Q9NV31 184 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CLEC4EQ9ULY5 219 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PCDHB11Q9Y5F2 797 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 COL1A1P02452 1464 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PRORSD1PA6NEY8 169 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 GOSR2O14653 212 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 RECKO95980 971 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ALDH1A1P00352 501 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MT-ATP6P00846 226 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 TRHRP34981 398 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FKBP1BP68106 108 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ACER2Q5QJU3 275 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 NOTUMQ6P988 496 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MON1AQ86VX9 555 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 EDEM1Q92611 657 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 HMCESQ96FZ2 354 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FSD1LQ9BXM9 530 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SYT4Q9H2B2 425 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 DPEP2Q9H4A9 486 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SCML2Q9UQR0 700 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 LTBP4Q8N2S1 1624 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF726A6NNF4 738 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MMP7P09237 267 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CAMLGP49069 296 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM115Q12893 351 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MPZL3Q6UWV2 235 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM151BQ6UXP7 276 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF765Q7L2R6 523 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FBXO16Q8IX29 292 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 C1orf87Q8N0U7 546 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MAPK15Q8TD08 544 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 OR5B2Q96R09 309 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 RNF2Q99496 336 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ACE2Q9BYF1 805 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 NIF3L1Q9GZT8 377 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 UBQLN3Q9H347 655 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 TBC1D17Q9HA65 648 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 DNAJC4Q9NNZ3 241 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 POT1Q9NUX5 634 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 GIMAP2Q9UG22 337 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ATRNL1Q5VV63 1379 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF26H0Y7S4 382 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 AGPAT2O15120 278 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF11O60813 436 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FABP3P05413 133 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PGAM1P18669 254 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SDHAP31040 664 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 BMP8BP34820 402 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 IGFALSP35858 605 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PNPLA4P41247 253 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 OR10A3P58181 314 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 CNTN2Q02246 1040 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM183BQ1AE95 376 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SV2CQ496J9 727 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MARCH8Q5T0T0 291 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF5Q5TYX0 476 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 MANEALQ5VSG8 457 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 PRAMEF6Q5VXH4 476 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 B3GLCTQ6Y288 498 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 BMP8AQ7Z5Y6 402 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 LRRC28Q86X40 367 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 FEZF2Q8TBJ5 459 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ALG3Q92685 438 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 ACSF2Q96CM8 615 aaPredicted RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 COA4Q9NYJ1 87 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 METTL1Q9UBP6 276 aaKnown RBP6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SUSD2Q9UGT4 822 aa6.41□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC22A20A6NK97 555 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 PMM2O15305 246 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 CHADO15335 359 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 CSF1P09603 554 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 SERPINA2P20848 420 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 SMSP52788 366 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 TLE2Q04725 743 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 LCP2Q13094 533 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 CYP1B1Q16678 543 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC9B1Q4ZJI4 515 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 OVOS1Q6IE37 1185 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 NRSN1Q8IZ57 195 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 OR56B4Q8NH76 319 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 BTF3L4Q96K17 158 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 OR7D2Q96RA2 312 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 ALKBH7Q9BT30 221 aaPredicted RBP6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 VAMP8Q9BV40 100 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 MRPL37Q9BZE1 423 aaKnown RBP6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 RRAGCQ9HB90 399 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 A6NIZ1 184 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 ANKRD63C9JTQ0 380 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF208O43345 1280 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 USP17L7P0C7H9 530 aa6.4□□□□□ -1.38
PDGFRA-201ENST00000257290 STAG3L1P0CL83 205 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms