RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RNF215Q9Y6U7 377 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 PRAMEF25A6NGN4 478 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 IGHG1P01857 330 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 HCKP08631 526 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 DAG1Q14118 895 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 PDK3Q15120 406 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 OR52R1Q8NGF1 315 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 FAM110BQ8TC76 370 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 OR5B2Q96R09 309 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 A0A1W2PPW3 197 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 PRR33A8MZF0 331 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 LATO43561 262 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 TSPAN12O95859 305 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 ELAVL4P26378 380 aaKnown RBP12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 EMP3P54852 163 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 SUMO3P55854 103 aaPredicted RBP12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 UFM1P61960 85 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 ABCA11PQ4W5N1 156 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 XKR5Q6UX68 686 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 S100A7AQ86SG5 101 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 ISCA2Q86U28 154 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 OR9A2Q8NGT5 310 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 IGSF5Q9NSI5 407 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 MRPL39Q9NYK5 338 aaKnown RBP12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 SNX11Q9Y5W9 270 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 FER1L6Q2WGJ9 1857 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 hCG_2039718K7EN88 272 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 RAD51DO75771 328 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 NDUFB2O95178 105 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 GMPRP36959 345 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 CAMK2DQ13557 499 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 SSPNQ14714 243 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 FBXO48Q5FWF7 155 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 ABHD11Q8NFV4 315 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 SMAD5Q99717 465 aaKnown RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 ABCB9Q9NP78 766 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 KLHL9Q9P2J3 617 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 MEGF11A6BM72 1044 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 GLOD5A6NK44 160 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 RTCAO00442 366 aaKnown RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 DLL1O00548 723 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 GNB5O14775 395 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 TMPRSS3P57727 454 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 CNN3Q15417 329 aaKnown RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 OGFOD2Q6N063 350 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC27A4Q6P1M0 643 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 SETD6Q8TBK2 473 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 NEIL2Q969S2 332 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC7A6OSQ96CW6 309 aaPredicted RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 OR10A5Q9H207 317 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 OR10A2Q9H208 303 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 FAM86C1Q9NVL1 165 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 GPC6Q9Y625 555 aaPredicted RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 KLK10O43240 276 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 TAP2Q03519 686 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 DEFB109BQ30KR1 87 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF704Q6ZNC4 412 aaPredicted RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 RNF113BQ8IZP6 322 aaKnown RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 ABTB1Q969K4 478 aaPredicted RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 HBEGFQ99075 208 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 ACTR6Q9GZN1 396 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 GPR83Q9NYM4 423 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 ARGFXA6NJG6 315 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 LRRC30A6NM36 301 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 GABRR3A8MPY1 467 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 PRKCAP17252 672 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 CCNOP22674 350 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 GANABQ14697 944 aaKnown RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 THOC7Q6I9Y2 204 aaKnown RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 MED25Q71SY5 747 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 MRPL21Q7Z2W9 205 aaKnown RBP12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF565Q8N9K5 539 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 PYDC1Q8WXC3 89 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 CST11Q9H112 138 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 PACSIN3Q9UKS6 424 aa12.63□□□□□ -0.39
PRPF38A-201ENST00000257181 LOC105369274A0A096LPK9 316 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 A0A1B0GTQ1 180 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 ANTXRLA6NF34 631 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 OR6C70A6NIJ9 312 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 K7ESM1 405 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 SMNDC1O75940 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 STATHP02808 62 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 ITGA5P08648 1049 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 GMFBP60983 142 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 CPEB2Q7Z5Q1 589 aaKnown RBP12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 TIGD4Q8IY51 512 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 OR4N4Q8N0Y3 316 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 L3MBTL4Q8NA19 623 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 OR52J3Q8NH60 311 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 CCDC107Q8WV48 283 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF583Q96ND8 569 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 FN3KQ9H479 309 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 SLCO1B3Q9NPD5 702 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 C11orf16Q9NQ32 467 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 PLEKHA6Q9Y2H5 1048 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 ARPC2O15144 300 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 HLA-DPB1P04440 258 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 OR4D1Q15615 310 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms