RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CCDC117Q8IWD4 279 aaPredicted RBP11.15□□□□□ -0.62
CCNA1-201ENST00000255465 MFSD6LQ8IWD5 586 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 UBALD2Q8IYN6 164 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 SLC24A4Q8NFF2 622 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 THAP6Q8TBB0 222 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 KCTD13Q8WZ19 329 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 EDAQ92838 391 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 FAM162AQ96A26 154 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 CDKN2AIPNLQ96HQ2 116 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 PYURFQ96I23 114 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 ZNF583Q96ND8 569 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 GGACTQ9BVM4 153 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 SLC38A1Q9H2H9 487 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 FBRSL1Q9HCM7 1045 aaKnown RBP11.15□□□□□ -0.62
CCNA1-201ENST00000255465 TLR8Q9NR97 1041 aaKnown RBP11.15□□□□□ -0.62
CCNA1-201ENST00000255465 TDP1Q9NUW8 608 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 MYOFQ9NZM1 2061 aa11.15□□□□□ -0.62
CCNA1-201ENST00000255465 ELOVL7A1L3X0 281 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 BTBD17A6NE02 478 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 A8MT66 165 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 CXCR6O00574 342 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 DPYSL4O14531 572 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 CKMP06732 381 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 SRFP11831 508 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 APEX1P27695 318 aaKnown RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 NNMTP40261 264 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 ZFP36L2P47974 494 aaKnown RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 RPP30P78346 268 aaKnown RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 LRRC32Q14392 662 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 TSNQ15631 228 aaKnown RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 ARSIQ5FYB1 569 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 SLC35D3Q5M8T2 416 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF57Q68EA5 555 aaPredicted RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 ANKRD34AQ69YU3 496 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 RAET1GQ6H3X3 334 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 PUSL1Q8N0Z8 303 aaKnown RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 CELF5Q8N6W0 485 aaKnown RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 RASGEF1AQ8N9B8 481 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 OR10H5Q8NGA6 315 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 OR5J2Q8NH18 312 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 HTR3CQ8WXA8 447 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 ASB13Q8WXK3 278 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF669Q96BR6 464 aaPredicted RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 CHFRQ96EP1 664 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 TMEM74Q96NL1 305 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF599Q96NL3 588 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 LRRC3BQ96PB8 259 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 LGMNQ99538 433 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 MAP3K3Q99759 626 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 HHATLQ9HCP6 504 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 EXOSC4Q9NPD3 245 aaKnown RBP11.15□□□□□ -0.63
CCNA1-201ENST00000255465 OSER1Q9NX31 292 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 OBP2AQ9NY56 170 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 CCL26Q9Y258 94 aa11.15□□□□□ -0.63
CCNA1-201ENST00000255465 COL4A2P08572 1712 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 LOC285095A0A1B0GVY8 99 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 A0A1W2PQH9 124 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 FAM220BPB1ANY3 271 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 CIDEAO60543 219 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 CXCL3P19876 107 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 AGAP20933 346 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 SULT1E1P49888 294 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 VSX2P58304 361 aaPredicted RBP11.14□□□□□ -0.63
CCNA1-201ENST00000255465 CXADRP78310 365 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 ADIGQ0VDE8 80 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 MLLT11Q13015 90 aaPredicted RBP11.14□□□□□ -0.63
CCNA1-201ENST00000255465 HNRNPA0Q13151 305 aaKnown RBP11.14□□□□□ -0.63
CCNA1-201ENST00000255465 PEA15Q15121 130 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 LIPNQ5VXI9 398 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 CNIH2Q6PI25 160 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 SCD5Q86SK9 330 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 DENND1CQ8IV53 801 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 SLITRK4Q8IW52 837 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 DCUN1D3Q8IWE4 304 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 CNTN4Q8IWV2 1026 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 FAM71CQ8NEG0 241 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 STK35Q8TDR2 534 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 GPBAR1Q8TDU6 330 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 ACOT12Q8WYK0 555 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 ELMOD3Q96FG2 381 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 RPL10LQ96L21 214 aaKnown RBP11.14□□□□□ -0.63
CCNA1-201ENST00000255465 TRMT61BQ9BVS5 477 aaKnown RBP11.14□□□□□ -0.63
CCNA1-201ENST00000255465 ULBP1Q9BZM6 244 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 TOLLIPQ9H0E2 274 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 OPN3Q9H1Y3 402 aaPredicted RBP11.14□□□□□ -0.63
CCNA1-201ENST00000255465 FIS1Q9Y3D6 152 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 ZNF451Q9Y4E5 1061 aa11.14□□□□□ -0.63
CCNA1-201ENST00000255465 TSTD3H0UI37 97 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 STK25O00506 426 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 COCHO43405 550 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 OIP5O43482 229 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 TLR5O60602 858 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 RGS11O94810 467 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 CDRT1O95170 752 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 LATS1O95835 1130 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 EGFP01133 1207 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 CRHP06850 196 aa11.13□□□□□ -0.63
CCNA1-201ENST00000255465 UBBP0CG47 229 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms