RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 G3V2L1 256 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 UBFD1O14562 309 aaKnown RBP19.07■□□□□ 0.64
NEDD8-201ENST00000250495 GLRA3O75311 464 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 RAF1P04049 648 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 KLK2P20151 261 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 EVI2BP34910 448 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 DECR1Q16698 335 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 SH2D4BQ5SQS7 431 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 ZYG11AQ6WRX3 759 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 TRIM46Q7Z4K8 759 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 LRRN4CLQ8ND94 238 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.07■□□□□ 0.64
NEDD8-201ENST00000250495 MZB1Q8WU39 189 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 TXLNGYQ9BZA5 131 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 DSN1Q9H410 356 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 MYNNQ9NPC7 610 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 GALNT8Q9NY28 637 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 EMCNQ9ULC0 261 aa19.07■□□□□ 0.64
NEDD8-201ENST00000250495 A8MXE2 369 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 CASKO14936 926 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 HCRTR2O43614 444 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 CRHP06850 196 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 FAM153BP0C7A2 387 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 NTSP30990 170 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 MC3RP41968 323 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 CCT5P48643 541 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 CLK3P49761 638 aaKnown RBP19.06■□□□□ 0.64
NEDD8-201ENST00000250495 EEFSECP57772 596 aaKnown RBP19.06■□□□□ 0.64
NEDD8-201ENST00000250495 KEAP1Q14145 624 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 ZNHIT3Q15649 155 aaPredicted RBP19.06■□□□□ 0.64
NEDD8-201ENST00000250495 PRSS53Q2L4Q9 553 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 CCDC153Q494R4 210 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 FAM153CQ494X1 144 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 CFAP157Q5JU67 520 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 OR2A2Q6IF42 318 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 TMEM107Q6UX40 140 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 PLXDC2Q6UX71 529 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 P4HA3Q7Z4N8 544 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 GCNT2Q8N0V5 402 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 FADS6Q8N9I5 356 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 METTL2AQ96IZ6 378 aaKnown RBP19.06■□□□□ 0.64
NEDD8-201ENST00000250495 GLIPR2Q9H4G4 154 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 PTGES2Q9H7Z7 377 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 Q9N2J8 555 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 NDRG3Q9UGV2 375 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 PACSIN3Q9UKS6 424 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 ABCG2Q9UNQ0 655 aa19.06■□□□□ 0.64
NEDD8-201ENST00000250495 POLR3HQ9Y535 204 aaPredicted RBP19.06■□□□□ 0.64
NEDD8-201ENST00000250495 A0A1W2PPM1 405 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 LINC01387J3KSC0 135 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 SCO2O43819 266 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 FADS1O60427 444 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 RSL1D1O76021 490 aaKnown RBP19.05■□□□□ 0.64
NEDD8-201ENST00000250495 TGM6O95932 706 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 HK1P19367 917 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 TCEA1P23193 301 aaKnown RBP19.05■□□□□ 0.64
NEDD8-201ENST00000250495 PSMD4P55036 377 aaKnown RBP19.05■□□□□ 0.64
NEDD8-201ENST00000250495 B3GALT5-AS1P59052 145 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 DNAJB13P59910 316 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 GANABQ14697 944 aaKnown RBP19.05■□□□□ 0.64
NEDD8-201ENST00000250495 NOXRED1Q6NXP6 359 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 IKBIPQ70UQ0 350 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 MEIOBQ8N635 442 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 ELP4Q96EB1 424 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 RHOXF2Q9BQY4 288 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 PLEKHF2Q9H8W4 249 aa19.05■□□□□ 0.64
NEDD8-201ENST00000250495 DDX18Q9NVP1 670 aaKnown RBP19.05■□□□□ 0.64
NEDD8-201ENST00000250495 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 A0A1W2PNV4 684 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 SH3D21A4FU49 640 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 TTC36A6NLP5 189 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 UPK1AO00322 258 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 MSTNO14793 375 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 DIAPH2O60879 1101 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 TNFSF13O75888 250 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 PROCP04070 461 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 TUBBP07437 444 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 UROSP10746 265 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 H2AFXP16104 143 aaPredicted RBP19.04■□□□□ 0.64
NEDD8-201ENST00000250495 FRMD7Q6ZUT3 714 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 OR2L13Q8N349 312 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 OR2M3Q8NG83 312 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 AMDHD1Q96NU7 426 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 C3orf14Q9HBI5 128 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 ARGLU1Q9NWB6 273 aaPredicted RBP19.04■□□□□ 0.64
NEDD8-201ENST00000250495 FAM120CQ9NX05 1096 aaKnown RBP19.04■□□□□ 0.64
NEDD8-201ENST00000250495 MED11Q9P086 117 aa19.04■□□□□ 0.64
NEDD8-201ENST00000250495 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.04■□□□□ 0.64
NEDD8-201ENST00000250495 V9GYY5 206 aaPredicted RBP19.04■□□□□ 0.64
NEDD8-201ENST00000250495 SLC22A20A6NK97 555 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 B4DXG7 233 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 SEC22BO75396 215 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 ATE1O95260 518 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 PSMG1O95456 288 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 IL33O95760 270 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 HRGP04196 525 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 IFI6P09912 130 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 DEFB113Q30KQ7 82 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 RAET1LQ5VY80 246 aa19.03■□□□□ 0.64
NEDD8-201ENST00000250495 SH2D5Q6ZV89 423 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms