RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ZNF226Q9NYT6 803 aa21.74■■□□□ 1.07
SYNGR3-201ENST00000248121 ASCC3Q8N3C0 2202 aaKnown RBP21.74■■□□□ 1.07
SYNGR3-201ENST00000248121 CENPVL1A0A0U1RR11 272 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 OR2W5A6NFC9 320 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 HYAL3O43820 417 aaPredicted RBP21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 SEC14L2O76054 403 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 OXSR1O95747 527 aaPredicted RBP21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 SLC35E2P0CK97 266 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 GABRB1P18505 474 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 CHMP24386 653 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 DUSP8Q13202 625 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 PTGES3Q15185 160 aaKnown RBP21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 PLA2G2CQ5R387 149 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 PGBD2Q6P3X8 592 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 TMEM71Q6P5X7 295 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 PODNL1Q6PEZ8 512 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 OR52P1PQ8NH57 321 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 PEX11GQ96HA9 241 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 NAA50Q9GZZ1 169 aaKnown RBP21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 CLDN16Q9Y5I7 305 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 CACNA1HO95180 2353 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 FITM1A5D6W6 292 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 OR10H3O60404 316 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 SLITRK5O94991 958 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 PRKAR1BP31321 381 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 TTKP33981 857 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 ARL4DP49703 201 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 HPCAP84074 193 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 FAM53BQ14153 422 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 ERV3-1Q14264 604 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 GPR107Q5VW38 600 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 TMEM236Q5W0B7 351 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 DHRS4L2Q6PKH6 230 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 RHOXF1Q8NHV9 184 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 ATOH1Q92858 354 aaPredicted RBP21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 FNDC11Q9BVV2 318 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 LRRN3Q9H3W5 708 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 ZNF768Q9H5H4 540 aaKnown RBP21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 RXFP3Q9NSD7 469 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 TPRKBQ9Y3C4 175 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 WDR45Q9Y484 360 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 MAU2Q9Y6X3 613 aa21.73■■□□□ 1.07
SYNGR3-201ENST00000248121 CLDN24A6NM45 220 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 CDC123O75794 336 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 NSA2O95478 260 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 CBX7O95931 251 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 IFI6P09912 130 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 CKMT1AP12532 417 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 RNH1P13489 461 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 DCKP27707 260 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 IDH2P48735 452 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 SMIM11AP58511 58 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 DAB2P98082 770 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 NDUFA9Q16795 377 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 OR6C4Q8NGE1 309 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 PIK3R3Q92569 461 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 ZNF350Q9GZX5 532 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 MTHFD2LQ9H903 347 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 FBXO34Q9NWN3 711 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 DHCR7Q9UBM7 475 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 MGAT4BQ9UQ53 548 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 PCDHGA10Q9Y5H3 936 aa21.72■■□□□ 1.07
SYNGR3-201ENST00000248121 ZAR1LA6NP61 321 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 M0R129 80 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 KHNYNO15037 678 aaKnown RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 OR2B3O76000 313 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 S1PR1P21453 382 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 CRISP1P54107 249 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 EMX1Q04741 257 aaPredicted RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 ALDH16A1Q8IZ83 802 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 CDRT4Q8N9R6 151 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 MORN4Q8NDC4 146 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 C12orf43Q96C57 262 aaKnown RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 MMABQ96EY8 250 aaPredicted RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 MPP4Q96JB8 637 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 VCX3AQ9NNX9 186 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 DUSP22Q9NRW4 184 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 PCDHGB1Q9Y5G3 927 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 IGFBP1P08833 259 aaPredicted RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 SF3A2Q15428 464 aaKnown RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 INAVAQ3KP66 663 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 CARFQ8N187 725 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 ZNF540Q8NDQ6 660 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 MUL1Q969V5 352 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 CNDP2Q96KP4 475 aaKnown RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 SIGLEC11Q96RL6 698 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 DOK1Q99704 481 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 UCK2Q9BZX2 261 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 CCDC90BQ9GZT6 254 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 SCN3BQ9NY72 215 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 ZNF443Q9Y2A4 671 aaPredicted RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 COL27A1Q8IZC6 1860 aaPredicted RBP21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 SEC16AO15027 2179 aa21.71■■□□□ 1.07
SYNGR3-201ENST00000248121 IGHV5-10-1A0A0J9YXX1 117 aa21.7■■□□□ 1.06
SYNGR3-201ENST00000248121 ZNF701M0R085 212 aaPredicted RBP21.7■■□□□ 1.06
SYNGR3-201ENST00000248121 FAM20BO75063 409 aa21.7■■□□□ 1.06
SYNGR3-201ENST00000248121 ALOX5P09917 674 aa21.7■■□□□ 1.06
SYNGR3-201ENST00000248121 TRHRP34981 398 aaPredicted RBP21.7■■□□□ 1.06
SYNGR3-201ENST00000248121 HOXC5Q00444 222 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms