RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 OR2T35Q8NGX2 323 aa8.85□□□□□ -0.99
HLA-DOA-201ENST00000229829 EXOSC8Q96B26 276 aaKnown RBP8.85□□□□□ -0.99
HLA-DOA-201ENST00000229829 ABCG5Q9H222 651 aa8.85□□□□□ -0.99
HLA-DOA-201ENST00000229829 KCNK12Q9HB15 430 aa8.85□□□□□ -0.99
HLA-DOA-201ENST00000229829 CUEDC1Q9NWM3 386 aaPredicted RBP8.85□□□□□ -0.99
HLA-DOA-201ENST00000229829 REV3LO60673 3130 aa8.85□□□□□ -0.99
HLA-DOA-201ENST00000229829 NUP210Q8TEM1 1887 aaPredicted RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 RANBP2P49792 3224 aaKnown RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 SPINT1O43278 529 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 NTN1O95631 604 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ACSM4P0C7M7 580 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 PIPP12273 146 aaPredicted RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 PSMB5P28074 263 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ETV5P41161 510 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 TSPAN5P62079 268 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 SNRPGP62308 76 aaKnown RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 OR2G6Q5TZ20 316 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ACSM5Q6NUN0 579 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 TMEM145Q8NBT3 493 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 TM4SF18Q96CE8 201 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF689Q96CS4 500 aaPredicted RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 C12orf66Q96MD2 445 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 SAP130Q9H0E3 1048 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 MIXL1Q9H2W2 232 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ASAH2Q9NR71 780 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 SEMA3GQ9NS98 782 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 RBFOX1Q9NWB1 397 aaKnown RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 HEATR5BQ9P2D3 2071 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF670-ZNF695F2Z2N8 137 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 POP7O75817 140 aaKnown RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 STATHP02808 62 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 H1F0P07305 194 aaKnown RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 HOXD4P09016 255 aaPredicted RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 STOMP27105 288 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 CTAG1AP78358 180 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 NCF4Q15080 339 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 AKIRIN2Q53H80 203 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 FAM209BQ5JX69 171 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 C12orf73Q69YU5 71 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 IL20RBQ6UXL0 311 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 SHFQ7M4L6 423 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 DGLUCYQ7Z3D6 616 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 NEURL3Q96EH8 262 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 GDF15Q99988 308 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZDHHC5Q9C0B5 715 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 SLC28A3Q9HAS3 691 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 C3orf14Q9HBI5 128 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 SIRT3Q9NTG7 399 aaPredicted RBP8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 PLCL2Q9UPR0 1127 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ASF1AQ9Y294 204 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 TRAPPC4Q9Y296 219 aa8.84□□□□□ -0.99
HLA-DOA-201ENST00000229829 ANTXRLA6NF34 631 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 PRKRAO75569 313 aaKnown RBP8.84□□□□□ -1
HLA-DOA-201ENST00000229829 SIX6O95475 246 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 CBX7O95931 251 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 ALPPP05187 535 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 OR12D1P0DN82 309 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 ANXA3P12429 323 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 NTHL1P78549 312 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 RAET1GQ6H3X3 334 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 PODNL1Q6PEZ8 512 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 LRFN4Q6PJG9 635 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 FAM129CQ86XR2 697 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 KREMEN2Q8NCW0 462 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 OR11H4Q8NGC9 324 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 XAGE5Q8WWM1 108 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 ZSWIM3Q96MP5 696 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 TXNL4BQ9NX01 149 aaKnown RBP8.84□□□□□ -1
HLA-DOA-201ENST00000229829 NDUFB11Q9NX14 153 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 SDHAF2Q9NX18 166 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 TEX10Q9NXF1 929 aaPredicted RBP8.84□□□□□ -1
HLA-DOA-201ENST00000229829 TAC3Q9UHF0 121 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 ENOPH1Q9UHY7 261 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 FBXL2Q9UKC9 423 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 HCN2Q9UL51 889 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 A4GNTQ9UNA3 340 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 STUB1Q9UNE7 303 aa8.84□□□□□ -1
HLA-DOA-201ENST00000229829 HYKKA2RU49 373 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 ARRDC5A6NEK1 342 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 AKAP8O43823 692 aaKnown RBP8.83□□□□□ -1
HLA-DOA-201ENST00000229829 GMDSO60547 372 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 SRPRAP08240 638 aaKnown RBP8.83□□□□□ -1
HLA-DOA-201ENST00000229829 ALPPL2P10696 532 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 CXCL3P19876 107 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 MMP11P24347 488 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 RPL3P39023 403 aaKnown RBP8.83□□□□□ -1
HLA-DOA-201ENST00000229829 ATP12AP54707 1039 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 ERVK-25P63136 954 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 HSF2Q03933 536 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 LGALS3BPQ08380 585 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 SCRN3Q0VDG4 424 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 TNK1Q13470 666 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 HEPACAMQ14CZ8 416 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -1
HLA-DOA-201ENST00000229829 KLHL22Q53GT1 634 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 ATAT1Q5SQI0 421 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 PRAMEF14Q5SWL7 426 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 PRAMEF13Q5VWM6 474 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 LILRA6Q6PI73 481 aa8.83□□□□□ -1
HLA-DOA-201ENST00000229829 UNC5DQ6UXZ4 953 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms