RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NEIL3Q8TAT5 605 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 HMGB4Q8WW32 186 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 KLK4Q9Y5K2 254 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 FAAHO00519 579 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 SLC30A4O14863 429 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 RAB36O95755 333 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 SRP9P49458 86 aaKnown RBP14.15□□□□□ -0.14
EFNB1-201ENST00000204961 ELAVL3Q14576 367 aaKnown RBP14.15□□□□□ -0.14
EFNB1-201ENST00000204961 ODF4Q2M2E3 257 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 DEFB110Q30KQ9 67 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 ZNF544Q6NX49 715 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 ARL14Q8N4G2 192 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 TBC1D19Q8N5T2 526 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 NANOGP1Q8N7R0 232 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 KATNB1Q9BVA0 655 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 CDCA4Q9BXL8 241 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 V9GYH0 126 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 ANKRD61A6NGH8 418 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 NOS3P29474 1203 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 KIR2DL3P43628 341 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 OR10A3P58181 314 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 PCDH1Q08174 1060 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 SLX4IPQ5VYV7 408 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 TANGO2Q6ICL3 276 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 SLC27A4Q6P1M0 643 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 DNAJC5GQ8N7S2 189 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 OR52E1Q8NGJ3 308 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 MAGEB10Q96LZ2 347 aaPredicted RBP14.15□□□□□ -0.14
EFNB1-201ENST00000204961 GALNT9Q9HCQ5 603 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 ZNF624Q9P2J8 865 aaPredicted RBP14.15□□□□□ -0.14
EFNB1-201ENST00000204961 SEC14L4Q9UDX3 406 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 SLC7A7Q9UM01 511 aa14.15□□□□□ -0.14
EFNB1-201ENST00000204961 TRAV27A0A087WT01 109 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 LRRN3E7EW58 273 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 CISD3P0C7P0 127 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 RPL3P39023 403 aaKnown RBP14.14□□□□□ -0.15
EFNB1-201ENST00000204961 TAS2R38P59533 333 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 DCDC1P59894 354 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 PSPHP78330 225 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 EXOSC7Q15024 291 aaKnown RBP14.14□□□□□ -0.15
EFNB1-201ENST00000204961 PRSS41Q7RTY9 318 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 CPA6Q8N4T0 437 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 RIPOR3Q96MK2 946 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 CAMK1GQ96NX5 476 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 LRRN3Q9H3W5 708 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 MAN2C1Q9NTJ4 1040 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 FAM186AA6NE01 2351 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 TNFRSF10AO00220 468 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 E2F2Q14209 437 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 EIF4HQ15056 248 aaKnown RBP14.14□□□□□ -0.15
EFNB1-201ENST00000204961 METTL27Q8N6F8 245 aaPredicted RBP14.14□□□□□ -0.15
EFNB1-201ENST00000204961 OR7G1Q8NGA0 311 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 OR5T3Q8NGG3 340 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 FGF13Q92913 245 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 TBC1D20Q96BZ9 403 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 OR7D2Q96RA2 312 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 NKX3-1Q99801 234 aaPredicted RBP14.14□□□□□ -0.15
EFNB1-201ENST00000204961 GAL3ST1Q99999 423 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 HCAR1Q9BXC0 346 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 OR2B2Q9GZK3 357 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 PRSS16Q9NQE7 514 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 NLGN3Q9NZ94 848 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 SNX7Q9UNH6 387 aa14.14□□□□□ -0.15
EFNB1-201ENST00000204961 LRIT2A6NDA9 550 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 J3QLW9 94 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 CDC42EP2O14613 210 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 ZNF19P17023 458 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 EPHA5P54756 1037 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 FUT5Q11128 374 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 QPRTQ15274 297 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 IRF4Q15306 451 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 TRMT12Q53H54 448 aaKnown RBP14.13□□□□□ -0.15
EFNB1-201ENST00000204961 CEP78Q5JTW2 689 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 ENTPD8Q5MY95 495 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 RNF165Q6ZSG1 346 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 OR5K2Q8NHB8 316 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 PFN4Q8NHR9 129 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 GOT1L1Q8NHS2 421 aaPredicted RBP14.13□□□□□ -0.15
EFNB1-201ENST00000204961 C9orf43Q8TAL5 461 aaPredicted RBP14.13□□□□□ -0.15
EFNB1-201ENST00000204961 SUN5Q8TC36 379 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 COQ7Q99807 217 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 A0A1W2PRG6 482 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 PDE9AO76083 593 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 TOXO94900 526 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 POLR2CP19387 275 aaPredicted RBP14.13□□□□□ -0.15
EFNB1-201ENST00000204961 TBXA2RP21731 343 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 HTR2BP41595 481 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 GCGRP47871 477 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 WNT4P56705 351 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 CAMKMTQ7Z624 323 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 PARGQ86W56 976 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 OR2A1Q8NGT9 310 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 SPPL3Q8TCT6 385 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 LCN9Q8WX39 176 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 UFD1Q92890 307 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 FKBP14Q9NWM8 211 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 CCDC59Q9P031 241 aaKnown RBP14.13□□□□□ -0.15
EFNB1-201ENST00000204961 FAM172BPA6NC97 362 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 ZNF670-ZNF695F2Z2N8 137 aa14.13□□□□□ -0.15
EFNB1-201ENST00000204961 PEX12O00623 359 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms