RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SLC16A14Q7RTX9 510 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SH3RF1Q7Z6J0 888 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 CLEC10AQ8IUN9 316 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 HS3ST5Q8IZT8 346 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 PHOSPHO2Q8TCD6 241 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 ARSGQ96EG1 525 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 RIMS4Q9H426 269 aaPredicted RBP3.28□□□□□ -1.88
NEB-201ENST00000172853 PNPLA3Q9NST1 481 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TMLHEQ9NVH6 421 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 SPHK1Q9NYA1 384 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TESMINQ9Y4I5 508 aa3.28□□□□□ -1.88
NEB-201ENST00000172853 TGDSO95455 350 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 PAK4O96013 591 aaPredicted RBP3.28□□□□□ -1.89
NEB-201ENST00000172853 OR4E1P0C645 316 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 PTAFRP25105 342 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 MAP2K3P46734 347 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 RAB8AP61006 207 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 Q1RN00 199 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 SPNS3Q6ZMD2 512 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 ZNF598Q86UK7 904 aaKnown RBP3.28□□□□□ -1.89
NEB-201ENST00000172853 SLC15A4Q8N697 577 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 TPPP3Q9BW30 176 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 DISP1Q96F81 1524 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 UGT1A9O60656 530 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 ECI2O75521 394 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.89
NEB-201ENST00000172853 BPGMP07738 259 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 RHOP08100 348 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 GATMP50440 423 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 BMXP51813 675 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 LIMK2P53671 638 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 OR52E8Q6IFG1 317 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 TSEN54Q7Z6J9 526 aaKnown RBP3.28□□□□□ -1.89
NEB-201ENST00000172853 WDR31Q8NA23 367 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 ZNF417Q8TAU3 575 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 ZNF587Q96SQ5 575 aaPredicted RBP3.28□□□□□ -1.89
NEB-201ENST00000172853 TMEM231Q9H6L2 316 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 WDR55Q9H6Y2 383 aaPredicted RBP3.28□□□□□ -1.89
NEB-201ENST00000172853 UGT1A7Q9HAW7 530 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 UGT1A10Q9HAW8 530 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 UGT1A8Q9HAW9 530 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 ZMAT5Q9UDW3 170 aaKnown RBP3.28□□□□□ -1.89
NEB-201ENST00000172853 FBXL3Q9UKT7 428 aa3.28□□□□□ -1.89
NEB-201ENST00000172853 A0A0A6YYH2 397 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 A0A1B0GTW7 788 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 A6NJ64 397 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 BCAT2O15382 392 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 ADAM11O75078 769 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 MEP1AQ16819 746 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 AWAT2Q6E213 333 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ZNF704Q6ZNC4 412 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 CLNKQ7Z7G1 428 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 NIPA2Q8N8Q9 360 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 BPIFCQ8NFQ6 507 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 RDH14Q9HBH5 336 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 PLCXD1Q9NUJ7 323 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SLC23A2Q9UGH3 650 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 KCNMB2Q9Y691 235 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 UNC13BO14795 1591 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SAP18O00422 153 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 LILRB3O75022 631 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 EGR1P18146 543 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SSTR1P30872 391 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 FAAP100Q0VG06 881 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 NECTIN1Q15223 517 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 LRRC38Q5VT99 294 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ZCCHC9Q8N567 271 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 GATSQ8NAP1 163 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 NUP43Q8NFH3 380 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 YTHDF1Q9BYJ9 559 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 BARX1Q9HBU1 254 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 PIGVQ9NUD9 493 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 MKS1Q9NXB0 559 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 HDAC3O15379 428 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 NARSO43776 548 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 HLA-DOBP13765 273 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 G0S2P27469 103 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ADRA1BP35368 520 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 TAS2R31P59538 309 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 AUHQ13825 339 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 NAPRTQ6XQN6 538 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 WFDC8Q8IUA0 241 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 LRRC25Q8N386 305 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 ZNF461Q8TAF7 563 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ZFPM2Q8WW38 1151 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ZNF597Q96LX8 424 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 DUSP22Q9NRW4 184 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 POLLQ9UGP5 575 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 NWD1Q149M9 1564 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 NUDT21O43809 227 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 NTSR2O95665 410 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 GCGP01275 180 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 PROCP04070 461 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 POU2F1P14859 743 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 IDUAP35475 653 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ETV5P41161 510 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 EIF2DP41214 584 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 YAP1P46937 504 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 NOVA1P51513 510 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 MRPS21P82921 87 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms