RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 WdcpQ6NV72 663 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Npsr1Q8BZP8 371 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ly6g5cQ8K1T5 149 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Lsm1Q8VC85 133 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rab40bQ8VHP8 278 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem168Q91VX9 697 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 TipinQ91WA1 278 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Moxd1Q9CXI3 613 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mdm1Q9D067 708 aa9.44□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr74A2BHP6 318 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr640E9Q7P5 314 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cyp21P03940 487 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmco2P0C1V4 183 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pdx1P52946 284 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Drd2P61168 444 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ap2s1P62743 142 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gabrb3P63080 473 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mmp11Q02853 492 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cldn34b4Q3V0X2 211 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Taar7aQ5QD12 358 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Kat7Q5SVQ0 613 aaKnown RBP9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pan3Q640Q5 837 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Elfn2Q68FM6 823 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1477Q7TQQ7 315 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Unc119bQ8C4B4 251 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Fam149aQ8CFV2 787 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem98Q91X86 226 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cyp4a30bA0A087WS15 508 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 FpgtG5E8F4 590 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 FaimlJ3QPY3 178 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cd48P18181 240 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ccr3P51678 359 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Eef2kmtQ3UZW7 335 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Lin54Q571G4 749 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Dcaf13Q6PAC3 445 aaKnown RBP9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 S100a15aQ6S5I3 108 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hfe2Q7TQ32 420 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hpf1Q8CFE2 346 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Usb1Q91W78 267 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 FcrlaQ920A9 352 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Q9CPZ3 230 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Chmp1b2Q9CQD4 199 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmigd1Q9D7L8 261 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 PpieQ9QZH3 301 aaKnown RBP9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rgs6Q9Z2H2 472 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Scn10aQ6QIY3 1958 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1025-ps1A0A140T8K3 312 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tbc1d25A1A5B6 742 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm21103E9Q2Q1 267 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm8020F6WLE9 229 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 TspearJ3S6Y1 670 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 AhrP30561 848 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gpx3P46412 226 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Crtc2Q3U182 692 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mvb12aQ78HU3 271 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Prr14Q7TPN9 612 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Fam76bQ80XP8 339 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Q8C4P0 716 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pramef8Q8CE24 480 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gpr1Q8K087 353 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 St8sia6Q8K4T1 398 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr643Q8VGY1 314 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 HnrnpllQ921F4 591 aaKnown RBP9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Edem1Q925U4 652 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Dhrs4Q99LB2 279 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 MrgprhQ99MT8 321 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mrps14Q9CR88 128 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Serpinb7Q9D695 380 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem138Q9D6G5 162 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 ApmapQ9D7N9 415 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ndrg3Q9QYF9 375 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 H2afb1S4R1E0 115 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 H2afb3S4R1G7 115 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Clip3B9EHT4 547 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Nxpe3B9EKK6 559 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm20431E9PY39 371 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cd14P10810 366 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Nudt19P11930 357 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc2a9Q3T9X0 538 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gtpbp2Q3UJK4 602 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pex11gQ6P6M5 241 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Coq4Q8BGB8 266 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 EfhbQ8CDU5 853 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cacul1Q8R0X2 377 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn1r33Q8R2E0 305 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Arl6ip5Q8R5J9 188 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Med9Q8VCS6 142 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Recql5Q8VID5 982 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Creb3l4Q9D2A5 370 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tssk4Q9D411 328 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hcar2Q9EP66 360 aa9.43□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1193A2AV13 318 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tomm5B1AXP6 51 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cnih2O35089 160 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 FxnO35943 207 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Kcne1P23299 129 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tnfsf9P41274 309 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tbpl1P62340 186 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Aup1P70295 410 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Alg11Q3TZM9 492 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms