RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Olfr622Q8VGY7 317 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tex13aA2AFS9 377 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fthl17bA2AHC5 176 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fthl17cA2AHC6 176 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Mthfd2lD3YZG8 338 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr294F7CWV4 335 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Bloc1s1O55102 125 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Wnt6P22727 364 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rps15P62843 145 aaKnown RBP10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Idh3gP70404 393 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fthl17dQ3SXD1 176 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fthl17fQ3SXD2 176 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ms4a15Q3UPL6 245 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Zfp184Q7TSH9 737 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Itln1bQ80ZA0 313 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fndc9Q8BJN4 226 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cdkl3Q8BLF2 595 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Vmn1r71Q8VIC0 307 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Usp3Q91W36 520 aaKnown RBP10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Usb1Q91W78 267 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Fthl17Q99MX2 176 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rpl17Q9CPR4 184 aaKnown RBP10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Spcs2Q9CYN2 226 aaKnown RBP10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Atrnl1Q6A051 1378 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm43951A0A0N4SUT6 962 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm45713A0A1B0GS68 446 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm21936A0A1Y7VJE9 144 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm5519D3Z175 170 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gstp3F6RWR5 210 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Arl9F7BE40 171 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cntn1P12960 1020 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 BdnfP21237 249 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 ThpoP40226 356 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Il11ra2P70225 432 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Kcnj8P97794 424 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Emx1Q04742 257 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Nlrc3Q5DU56 1064 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Hspb6Q5EBG6 162 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Slc26a10Q5EBI0 492 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Txnl4bQ8BUH1 149 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gm5591Q8CDK1 855 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Mrps23Q8VE22 177 aaKnown RBP10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr807Q8VGI9 311 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Med28Q920D3 178 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Clstn3Q99JH7 956 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ppp1r35Q9D8C8 260 aa10.31□□□□□ -0.76
Ciita-201ENSMUST00000023147 Rpl7a-ps3A0A140T8L1 270 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Amy2a1E9PV85 245 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Vmn2r91E9Q2U5 856 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Zfp395E9Q5N9 508 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Lrrc31F6VYM1 502 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Amy2P00688 508 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Csn1s2bP02664 143 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 ThbdP15306 577 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Zp2P20239 713 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Bmp7P23359 430 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 RpiaP47968 303 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 EnsaP60840 121 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 GcdhQ60759 438 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 BC061237Q6P8I2 184 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 EloaQ8CB77 773 aaKnown RBP10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Znf668Q8K2R5 619 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 D8Ertd738eQ8R1F0 94 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Camk1gQ91VB2 477 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 GabarapQ9DCD6 117 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Hipk2Q9QZR5 1196 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Daw1D3Z7A5 415 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Enpp1P06802 906 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ptpn22P29352 802 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Eif4eP63073 217 aaKnown RBP10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Sez6l2Q4V9Z5 910 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tnfrsf8Q60846 498 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gas6Q61592 674 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 ScapQ6GQT6 1276 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Pced1aQ6P1Z5 449 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Naa50Q6PGB6 169 aaKnown RBP10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cfap97Q6ZPR1 541 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Sphk1Q8CI15 382 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Q8K039 155 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ddit4lQ8VHZ5 193 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 RhebQ921J2 184 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Arl5bQ9D4P0 179 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Stra6lQ9DBN1 621 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 AcoxlQ9DBS4 632 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Gal3st1Q9JHE4 423 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Extl1Q9JKV7 669 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 ChrdQ9Z0E2 948 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr1253A2AUA2 318 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Vmn2r114E9Q281 856 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 BckdkO55028 412 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 P01652 108 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 F3P20352 294 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Cd28P31041 218 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Tm9sf2P58021 662 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Xkr5Q5GH66 676 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Carns1Q6ZPS2 827 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Olfr1251Q7TQZ3 318 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 NarsQ8BP47 559 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Pggt1bQ8BUY9 377 aa10.3□□□□□ -0.76
Ciita-201ENSMUST00000023147 Ankrd33Q8BXP5 385 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms