RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PTGFRNQ9P2B2 879 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 SHISA7A6NL88 538 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 FAM170BA6NMN3 283 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 NTN1O95631 604 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 AGR2O95994 175 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 EIF2S1P05198 315 aaKnown RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 CCNYL3P0C7X3 344 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 CKMT1AP12532 417 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 PORP16435 677 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 RABIFP47224 123 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 HOXC5Q00444 222 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 RELAQ04206 551 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 ST3GAL3Q11203 375 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 CCINQ13939 588 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 ARHGAP11BQ3KRB8 267 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 SYT14P1Q58G82 188 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 PRSS41Q7RTY9 318 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 SHISA5Q8N114 240 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 SLC34A3Q8N130 599 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 AMER2Q8N7J2 671 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 FRMD1Q8N878 549 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 BAHD1Q8TBE0 780 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 GNPDA2Q8TDQ7 276 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 RERGQ96A58 199 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 CDADC1Q9BWV3 514 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 EGLN3Q9H6Z9 239 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 TRIM45Q9H8W5 580 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 MTHFD2LQ9H903 347 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 LYRM4Q9HD34 91 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 POT1Q9NUX5 634 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 KLHL28Q9NXS3 571 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 CCDC59Q9P031 241 aaKnown RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 NTNG1Q9Y2I2 539 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 ENTPD2Q9Y5L3 495 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 A3GALT2U3KPV4 340 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 PRAMEF26H0Y7S4 382 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 KPNA4O00629 521 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 CSO75390 466 aaKnown RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 SCG5P05408 212 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 CELA2BP08218 269 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ACP2P11117 423 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 SMSP52788 366 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 RGS8P57771 180 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 UBE2IP63279 158 aaKnown RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ID2Q02363 134 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 DUSP5Q16690 384 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 PUS10Q3MIT2 529 aaKnown RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 TRMT12Q53H54 448 aaKnown RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 RNLSQ5VYX0 342 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 TYW3Q6IPR3 259 aaKnown RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ZNF730Q6ZMV8 503 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ZNF554Q86TJ5 538 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 FLCNQ8NFG4 579 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 RSC1A1Q92681 617 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 MROQ9BYG7 248 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ANKRD19PQ9H560 264 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 USP36Q9P275 1121 aaKnown RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 DAPK2Q9UIK4 370 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ZNF443Q9Y2A4 671 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 C2CD4DB7Z1M9 353 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 IFNGR2P38484 337 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 RPS3AP61247 264 aaKnown RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 TSPAN31Q12999 210 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 TIMM50Q3ZCQ8 353 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ZNF628Q5EBL2 1059 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ZNF542PQ5EBM4 170 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 PERM1Q5SV97 790 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 FHL5Q5TD97 284 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 NANOGP1Q8N7R0 232 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 LRR1Q96L50 414 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 ZNF582Q96NG8 517 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-211ENST00000641213 GDF15Q99988 308 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 MND1Q9BWT6 205 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 GSDMCQ9BYG8 508 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 HHATLQ9HCP6 504 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 HRASLS2Q9NWW9 162 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 CNIH4Q9P003 139 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 WDR45Q9Y484 360 aa15.95■□□□□ 0.14
PHGDH-211ENST00000641213 FAM221BA6H8Z2 402 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 AP3D1O14617 1153 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 ZSCAN9O15535 394 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-211ENST00000641213 KIAA0513O60268 411 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 LDB3O75112 727 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 OMPP47874 163 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 MLLT1Q03111 559 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-211ENST00000641213 EIF2B5Q13144 721 aaKnown RBP15.94■□□□□ 0.14
PHGDH-211ENST00000641213 OXA1LQ15070 435 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 SPHARQ15513 63 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 SNAPC1Q16533 368 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 TRIM16LQ309B1 348 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 RNF44Q7L0R7 432 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 NKAIN4Q8IVV8 208 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 TMEM52Q8NDY8 209 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 OR8D4Q8NGM9 314 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 TEX47Q8TBZ9 253 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 DOK4Q8TEW6 326 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 FAM46AQ96IP4 442 aaKnown RBP15.94■□□□□ 0.14
PHGDH-211ENST00000641213 MCHR1Q99705 422 aa15.94■□□□□ 0.14
PHGDH-211ENST00000641213 C6orf62Q9GZU0 229 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-211ENST00000641213 SAP130Q9H0E3 1048 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms