RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 FOXL1Q12952 345 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 ITGADQ13349 1161 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 LAPTM5Q13571 262 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 ACAP2Q15057 778 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 PPP1R3AQ16821 1122 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 HSP90AA5PQ58FG0 334 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 TMEM108Q6UXF1 575 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 DEF8Q6ZN54 512 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 USP43Q70EL4 1123 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 SSX8Q7RTT4 187 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 PEX26Q7Z412 305 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 LUZP1Q86V48 1076 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 GABRG1Q8N1C3 465 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 OR2W6PQ8NHA6 318 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 RGMAQ96B86 450 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 CMTM7Q96FZ5 175 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 SORBS1Q9BX66 1292 aaKnown RBP9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 MS4A8Q9BY19 250 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 DSN1Q9H410 356 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 PTGES2Q9H7Z7 377 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 MYOZ1Q9NP98 299 aaPredicted RBP9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 IARS2Q9NSE4 1012 aaKnown RBP9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 PAQR5Q9NXK6 330 aaPredicted RBP9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 PPP4R1LQ9P1A2 415 aa9.75□□□□□ -0.85
PTP4A1-207ENST00000639568 KMT2CQ8NEZ4 4911 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 ZCWPW2A0A1B0GU75 182 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 OR2M5A3KFT3 312 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 LRP5LA4QPB2 252 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 SDR42E2A6NKP2 422 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 MIF4GDA9UHW6 222 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 AKR1B15C9JRZ8 316 aaPredicted RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 GOLGA6L19H0YKK7 550 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 MFAP3LO75121 409 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 PCNAP12004 261 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 TPSB2P20231 275 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 APEX1P27695 318 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 AGTR1P30556 359 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 CHN2P52757 468 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 HNRNPH2P55795 449 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 CDKL1Q00532 357 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 GANABQ14697 944 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 TPSAB1Q15661 275 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 C18orf21Q32NC0 220 aaPredicted RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 TMEM201Q5SNT2 666 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 RBM20Q5T481 1227 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 KHDRBS2Q5VWX1 349 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 ZNF544Q6NX49 715 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 UGT2A3Q6UWM9 527 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 Q6ZSR9 355 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 BHLHA15Q7RTS1 189 aaPredicted RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 ZCCHC7Q8N3Z6 543 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 HPS1Q92902 700 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 UBE2E3Q969T4 207 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 TMBIM1Q969X1 311 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 ADOQ96SZ5 270 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 ITPAQ9BY32 194 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 BPESC1Q9GZL8 116 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 DDX47Q9H0S4 455 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 WBP11Q9Y2W2 641 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 WNK1Q9H4A3 2382 aa9.74□□□□□ -0.85
PTP4A1-207ENST00000639568 NTN1O95631 604 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 DHRS4L1P0CG22 281 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 COL6A2P12110 1019 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 CD22P20273 847 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 DRD5P21918 477 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 IL12BP29460 328 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 EFR3AQ14156 821 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 MFSD12Q6NUT3 480 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 CYP20A1Q6UW02 462 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 C2CD4AQ8NCU7 369 aaPredicted RBP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 NUP43Q8NFH3 380 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 TRIM58Q8NG06 486 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 OR10D3Q8NH80 312 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 ZNF473Q8WTR7 871 aaKnown RBP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 PDLIM5Q96HC4 596 aaKnown RBP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 REXO5Q96IC2 774 aaKnown RBP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 HBEGFQ99075 208 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 OR51B5Q9H339 312 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 CNOT10Q9H9A5 744 aaKnown RBP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 SDHAF3Q9NRP4 125 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 LYARQ9NX58 379 aaKnown RBP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 ASIC3Q9UHC3 531 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 IKZF3Q9UKT9 509 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 PACSIN2Q9UNF0 486 aaPredicted RBP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 OARD1Q9Y530 152 aa9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 YLPM1P49750 1951 aaKnown RBP9.73□□□□□ -0.85
PTP4A1-207ENST00000639568 NPIPA5A0A0B4J1W7 369 aa9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 A0A1W2PR48 441 aa9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 TCRBV7S3A2A0A539 114 aa9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 NPEPPSL1A6NEC2 478 aa9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 NCF1BA6NI72 391 aaPredicted RBP9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 NCF1CA8MVU1 366 aaPredicted RBP9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 NPIPA7E9PJI5 369 aa9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 NDUFB5O43674 189 aa9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 SNUPNO95149 360 aaKnown RBP9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 CCDC175P0C221 793 aa9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 FAM58BPP0C7Q3 252 aa9.72□□□□□ -0.85
PTP4A1-207ENST00000639568 PABPC4LP0CB38 370 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms