RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	SGTB	Q96EQ0	304 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	COQ10A	Q96MF6	247 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	FOPNL	Q96NB1	174 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	ERMAP	Q96PL5	475 aa	Predicted RBP	12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	OR4K3	Q96R72	315 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SLC6A17	Q9H1V8	727 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	DLL4	Q9NR61	685 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	KCMF1	Q9P0J7	381 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	KIF25	Q9UIL4	384 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SLC25A13	Q9UJS0	675 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	WNT6	Q9Y6F9	365 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SESN1	Q9Y6P5	492 aa		12.88	□□□□□ -0.35
KCNMA1-238	ENST00000638514	TRBV23OR9-2	A0A075B6M9	112 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	GPR171	O14626	319 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PCDH8	O95206	1070 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	FURIN	P09958	794 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	CSF2RA	P15509	400 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SYN1	P17600	705 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	CTSO	P43234	321 aa	Predicted RBP	12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	MPEG1	Q2M385	716 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	POF1B	Q8WVV4	589 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	MVB12B	Q9H7P6	319 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514		A0A1W2PRB8	838 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	AGAP14	A8MT82	685 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	RAB8A	P61006	207 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	MINDY4	Q4G0A6	757 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	ADAMTS19	Q8TE59	1207 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SEC22C	Q9BRL7	303 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	HCFC1R1	Q9NWW0	138 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SDHAF2	Q9NX18	166 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	COPS3	Q9UNS2	423 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514		Q9Y3F1	56 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	CASC3	O15234	703 aa	Known RBP	12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PTP4A3	O75365	173 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	EPHX1	P07099	455 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	RBMS1	P29558	406 aa	Known RBP	12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	RPL3	P39023	403 aa	Known RBP	12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SLC1A3	P43003	542 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PITPNB	P48739	271 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SRP9	P49458	86 aa	Known RBP	12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	NDUFA9	Q16795	377 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	KIAA1211L	Q6NV74	962 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	FGF11	Q92914	225 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PDXP	Q96GD0	296 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SORBS1	Q9BX66	1292 aa	Known RBP	12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SHARPIN	Q9H0F6	387 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	CYB5R1	Q9UHQ9	305 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PPIE	Q9UNP9	301 aa	Known RBP	12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	KCNMB2	Q9Y691	235 aa		12.87	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SSNA1	O43805	119 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SULT1A3	P0DMM9	295 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SULT1A4	P0DMN0	295 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	ACSL1	P33121	698 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PREP	P48147	710 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PODNL1	Q6PEZ8	512 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514		Q6ZVL8	140 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	GPR135	Q8IZ08	494 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	HSD17B8	Q92506	261 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PTP4A1	Q93096	173 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	HCN3	Q9P1Z3	774 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	MBD1	Q9UIS9	605 aa	Predicted RBP	12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	GPR52	Q9Y2T5	361 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	ZNF197	O14709	1029 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	HRG	P04196	525 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	EIF4E	P06730	217 aa	Known RBP	12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PEPD	P12955	493 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	MMP11	P24347	488 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	LCN1	P31025	176 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	MMP12	P39900	470 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	RPL35	P42766	123 aa	Known RBP	12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PRKAG1	P54619	331 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	CDK5	Q00535	292 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	MEF2A	Q02078	507 aa	Predicted RBP	12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	HSD17B12	Q53GQ0	312 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PLEKHS1	Q5SXH7	462 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	IL20RB	Q6UXL0	311 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	FTMT	Q8N4E7	242 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	ZNF485	Q8NCK3	441 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	OR2T4	Q8NH00	348 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	WFDC5	Q8TCV5	224 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514		A0A1B0GVC2	190 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514		A6NIN4	97 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	CHST10	O43529	356 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	EFCAB14	O75071	495 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	EFNB1	P98172	346 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PDE7A	Q13946	482 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	LYPD4	Q6UWN0	246 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	PRICKLE2	Q7Z3G6	844 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	COMMD6	Q7Z4G1	85 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	OR2T35	Q8NGX2	323 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	SLC38A5	Q8WUX1	472 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	LINC01599	Q8WXQ3	324 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	ADAMTS14	Q8WXS8	1223 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	WBP1	Q96G27	269 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	TMEM19	Q96HH6	336 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	BRD9	Q9H8M2	597 aa		12.86	□□□□□ -0.35
KCNMA1-238	ENST00000638514	ASB6	Q9NWX5	421 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms