RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 GXYLT2A0PJZ3 443 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 DEAF1O75398 565 aaPredicted RBP10.92□□□□□ -0.66
CLN6-223ENST00000637823 KLF7O75840 302 aaPredicted RBP10.92□□□□□ -0.66
CLN6-223ENST00000637823 TNFSF15O95150 251 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 LDLRP01130 860 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 OPN1SWP03999 348 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 CAPNS1P04632 268 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 ALPPP05187 535 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 CT45A8P0DMV1 189 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 CT45A9P0DMV2 189 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 CD247P20963 164 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 DRD5P21918 477 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 TRHRP34981 398 aaPredicted RBP10.92□□□□□ -0.66
CLN6-223ENST00000637823 VHLP40337 213 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 MAGEA2P43356 314 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 KCNJ5P48544 419 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 NOVA1P51513 510 aaKnown RBP10.92□□□□□ -0.66
CLN6-223ENST00000637823 GPR143P51810 404 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 DCAF7P61962 342 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 CHRNEQ04844 493 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 IFI44LQ53G44 452 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 CT45A2Q5DJT8 189 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 HMBOX1Q6NT76 420 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 FRRS1Q6ZNA5 592 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 TIPARPQ7Z3E1 657 aaKnown RBP10.92□□□□□ -0.66
CLN6-223ENST00000637823 VTCN1Q7Z7D3 282 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 AMIGO2Q86SJ2 522 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 GALNT15Q8N3T1 639 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 ESX1Q8N693 406 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 ZNF321PQ8N8H1 164 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 CATSPER1Q8NEC5 780 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 NFAM1Q8NET5 270 aaPredicted RBP10.92□□□□□ -0.66
CLN6-223ENST00000637823 B3GNT7Q8NFL0 401 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 OR2Y1Q8NGV0 311 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 SPPL2AQ8TCT8 520 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 NRG4Q8WWG1 115 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 GEMIN6Q8WXD5 167 aaKnown RBP10.92□□□□□ -0.66
CLN6-223ENST00000637823 PIK3R3Q92569 461 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 BDH2Q9BUT1 245 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 FAM117AQ9C073 453 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 ZNF350Q9GZX5 532 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 VCX3BQ9H321 246 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 Q9N2J8 555 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 DNAJB9Q9UBS3 223 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 ZNF232Q9UNY5 417 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 DTX4Q9Y2E6 619 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 PADI2Q9Y2J8 665 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 IFT52Q9Y366 437 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 PTRH2Q9Y3E5 179 aaKnown RBP10.92□□□□□ -0.66
CLN6-223ENST00000637823 WDR45Q9Y484 360 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 SAGE2PA6NJ88 616 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 PEX1O43933 1283 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 TPST1O60507 370 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 FCMRO60667 390 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 KCNK2O95069 426 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 CST1P01037 141 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 FABP3P05413 133 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 FESP07332 822 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 ITGA2P17301 1181 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 TCN2P20062 427 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 PIGAP37287 484 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 FOLR3P41439 243 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 FOXL2P58012 376 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 PSPHP78330 225 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 TRIP10Q15642 601 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 DUSP7Q16829 419 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 CYP27C1Q4G0S4 372 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 OGFRL1Q5TC84 451 aaPredicted RBP10.91□□□□□ -0.66
CLN6-223ENST00000637823 HLA-DQA1Q5Y7H0 255 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 TYW3Q6IPR3 259 aaKnown RBP10.91□□□□□ -0.66
CLN6-223ENST00000637823 PAPD4Q6PIY7 484 aaKnown RBP10.91□□□□□ -0.66
CLN6-223ENST00000637823 NPSR1Q6W5P4 371 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 SLC29A4Q7RTT9 530 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 OLIG3Q7RTU3 272 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 PEX5LQ8IYB4 626 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 ZNF619Q8N2I2 560 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 SMYD1Q8NB12 490 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 CT55Q8WUE5 264 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 ADAMTS14Q8WXS8 1223 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 PROX1Q92786 737 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 ADIPOR1Q96A54 375 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 RMND5BQ96G75 393 aaPredicted RBP10.91□□□□□ -0.66
CLN6-223ENST00000637823 LCORQ96JN0 433 aaPredicted RBP10.91□□□□□ -0.66
CLN6-223ENST00000637823 C7orf34Q96L11 122 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 ZNF354BQ96LW1 612 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 LPAR4Q99677 370 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 G6PC3Q9BUM1 346 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 PINK1Q9BXM7 581 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 ITPAQ9BY32 194 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 SEMA4CQ9C0C4 833 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 POLR1BQ9H9Y6 1135 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 CACYBPQ9HB71 228 aaKnown RBP10.91□□□□□ -0.66
CLN6-223ENST00000637823 FOXJ2Q9P0K8 574 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 MKLN1Q9UL63 735 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 CBLCQ9ULV8 474 aa10.91□□□□□ -0.66
CLN6-223ENST00000637823 FARSAQ9Y285 508 aaKnown RBP10.91□□□□□ -0.66
CLN6-223ENST00000637823 CNOT1A5YKK6 2376 aaKnown RBP10.91□□□□□ -0.66
CLN6-223ENST00000637823 IGHV3-20A0A0C4DH32 117 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 C2orf92A0A1B0GVN3 265 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms