RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ALPPP05187 535 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 C8AP07357 584 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ADRA2AP08913 450 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TIMP2P16035 220 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CPEP16870 476 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 DRD1P21728 446 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 GABRA5P31644 462 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 STAT5AP42229 794 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 KCNJ5P48544 419 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CDH11P55287 796 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 GPR50Q13585 617 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SF3A2Q15428 464 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 MINDY4Q4G0A6 757 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 C4orf17Q53FE4 359 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SLC25A30Q5SVS4 291 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 C19orf48Q6RUI8 117 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 BAIAP2L2Q6UXY1 529 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CD300LDQ6UXZ3 194 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 PLEKHM3Q6ZWE6 761 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CXXC5Q7LFL8 322 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 C16orf62Q7Z3J2 963 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TSEN54Q7Z6J9 526 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ADGRD2Q7Z7M1 963 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 AMZ2Q86W34 360 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 RASGEF1AQ8N9B8 481 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CHST14Q8NCH0 376 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 OR4K5Q8NGD3 323 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM163Q8TC26 289 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SLC7A6Q92536 515 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CIDECQ96AQ7 238 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 LRR1Q96L50 414 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 DMRTB1Q96MA1 342 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 MOGAT1Q96PD6 335 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 OR2A14Q96R47 310 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TRMT61BQ9BVS5 477 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SLC6A16Q9GZN6 736 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SRRQ9GZT4 340 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SLC25A19Q9HC21 320 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TRIM39Q9HCM9 518 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF334Q9HCZ1 680 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ZCCHC3Q9NUD5 404 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 RHCGQ9UBD6 479 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TRBV4-1A0A0J9YWV2 114 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 OR6C70A6NIJ9 312 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 DUXAA6NLW8 204 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ANHXE9PGG2 379 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SAP18O00422 153 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SYT5O00445 386 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 NPC1O15118 1278 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF821O75541 412 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ITGA10O75578 1167 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 POP7O75817 140 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 DNTTP04053 509 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CTSAP10619 480 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 PSKH1P11801 424 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TYRP14679 529 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CD22P20273 847 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 F8A1P23610 371 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 RPS19P39019 145 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SOX3P41225 446 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 MTNR1AP48039 350 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 NKX2-5P52952 324 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CASP9P55211 416 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 RAB14P61106 215 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TAGLNQ01995 201 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SF3B4Q15427 424 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 FNDC3BQ53EP0 1204 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF385BQ569K4 471 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 EOGTQ5NDL2 527 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 C22orf42Q6IC83 251 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 PGBD2Q6P3X8 592 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CDH24Q86UP0 819 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 IQCHQ86VS3 1027 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 MARCH9Q86YJ5 346 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 Q8N402 240 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 RNF175Q8N4F7 328 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM145Q8NBT3 493 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 OR2A12Q8NGT7 310 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 OR6F1Q8NGZ6 308 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CREB3L1Q96BA8 519 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 VWCEQ96DN2 955 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 DTD2Q96FN9 168 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TRAF4Q9BUZ4 470 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TAPBPLQ9BX59 468 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 MIR1-1HGQ9H1L0 117 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 CLEC4MQ9H2X3 399 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 RERGLQ9H628 205 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 HHATLQ9HCP6 504 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 ABCB9Q9NP78 766 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 FGF20Q9NP95 211 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 SPHK2Q9NRA0 654 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TXNL4BQ9NX01 149 aaKnown RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 PAQR5Q9NXK6 330 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 NDOR1Q9UHB4 597 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 MKL2Q9ULH7 1088 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 POLHQ9Y253 713 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 DNMT3AQ9Y6K1 912 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-214ENST00000637038 DMDP11532 3685 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 TRDV1A0A1B0GX56 115 aa3.75□□□□□ -1.81
SCN1A-214ENST00000637038 A0A1W2PRU2 124 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms