RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CYP27C1Q4G0S4 372 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 DNAL1Q4LDG9 190 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TRMT12Q53H54 448 aaKnown RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 PAGE3Q5JUK9 113 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ATAD3BQ5T9A4 648 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 FAAH2Q6GMR7 532 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 C8orf82Q6P1X6 216 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ERICH5Q6P6B1 374 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 SLC2A7Q6PXP3 512 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 FAM111BQ6SJ93 734 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 OPN5Q6U736 354 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 C6orf89Q6UWU4 347 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 DLEU7Q6UYE1 221 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 Q6ZS46 218 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 NET1Q7Z628 596 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ANKRD46Q86W74 232 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TREML1Q86YW5 311 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 C9orf40Q8IXQ3 194 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CLECL1Q8IZS7 167 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 GALNT16Q8N428 558 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CHDHQ8NE62 594 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TNIP2Q8NFZ5 429 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 OR52R1Q8NGF1 315 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 C16orf52Q8NHV5 167 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ADAMTS15Q8TE58 950 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 C8orf44Q96CB5 159 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 LRRC58Q96CX6 371 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 GIMAP5Q96F15 307 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 NSL1Q96IY1 281 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 LCORQ96JN0 433 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 LMF1Q96S06 567 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CPPED1Q9BRF8 314 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 G6PC3Q9BUM1 346 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TRIM4Q9C037 500 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ING2Q9H160 280 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 MMADHCQ9H3L0 296 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 MUC13Q9H3R2 512 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TMEM38AQ9H6F2 299 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 EPS8L2Q9H6S3 715 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TRIM45Q9H8W5 580 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TPT1P8Q9HAU6 139 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 FOLH1BQ9HBA9 442 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF160Q9HCG1 818 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 GPATCH2Q9NW75 528 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 MYOTQ9UBF9 498 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ABCD2Q9UBJ2 740 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 P2RX2Q9UBL9 471 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 BCAP29Q9UHQ4 241 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 PRPF19Q9UMS4 504 aaKnown RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 YARS2Q9Y2Z4 477 aaKnown RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 PCDHB14Q9Y5E9 798 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 PCDHGB6Q9Y5F9 930 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 SNX8Q9Y5X2 465 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 MRPS18BQ9Y676 258 aaKnown RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 KCNMB2Q9Y691 235 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 PCSK5Q92824 1860 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 PTPRQQ9UMZ3 2332 aa6.21□□□□□ -1.41
UPF3B-205ENST00000636792 TRBV11-1A0A0K0K1C0 115 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 A0A1W2PS29 197 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 MKRN2OSH3BPM6 223 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 PDE9AO76083 593 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 CPSF4O95639 269 aaKnown RBP6.21□□□□□ -1.42
UPF3B-205ENST00000636792 WNT11O96014 354 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 CLPSP04118 112 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 NGFRP08138 427 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 HOXB6P17509 224 aaKnown RBP6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ENDOUP21128 410 aaKnown RBP6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ITGA3P26006 1051 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 PIGAP37287 484 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 CDKN2CP42773 168 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 MAN2A2P49641 1150 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 CRISP3P54108 245 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 PNLIPRP2P54317 469 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 MLF1P58340 268 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 DSTNP60981 165 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 MRPS35P82673 323 aaKnown RBP6.21□□□□□ -1.42
UPF3B-205ENST00000636792 HPCAP84074 193 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 PSG6Q00889 435 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 BNIP1Q12981 228 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 SNTA1Q13424 505 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ART3Q13508 389 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ELOAQ14241 798 aaKnown RBP6.21□□□□□ -1.42
UPF3B-205ENST00000636792 LASP1Q14847 261 aaKnown RBP6.21□□□□□ -1.42
UPF3B-205ENST00000636792 RGNQ15493 299 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 INAQ16352 499 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 DECR1Q16698 335 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ZSWIM7Q19AV6 140 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF630Q2M218 657 aaPredicted RBP6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF750Q32MQ0 723 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 RUNDC3AQ59EK9 446 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 PIGGQ5H8A4 983 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 INTS11Q5TA45 600 aaKnown RBP6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ABHD17BQ5VST6 288 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 AGAP7PQ5VUJ5 663 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 HEPHL1Q6MZM0 1159 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 BORAQ6PGQ7 559 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 IGFL2Q6UWQ7 119 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 IGFL3Q6UXB1 125 aa6.21□□□□□ -1.42
UPF3B-205ENST00000636792 ISLR2Q6UXK2 745 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms