RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TRIQKQ629K1 86 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 FAM92BQ6ZTR7 304 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 FAM26EQ8N5C1 309 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC16A11Q8NCK7 471 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 C19orf18Q8NEA5 215 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 UFD1Q92890 307 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 ZNF514Q96K75 400 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC22A4Q9H015 551 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 EPHX3Q9H6B9 360 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 B3GAT2Q9NPZ5 323 aa13.17□□□□□ -0.3
CACNA1A-228ENST00000636610 ISM1B1AKI9 464 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 REM1O75628 298 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 ADH1CP00326 375 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 CXCR2P25025 360 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 MAPK9P45984 424 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 INPP1P49441 399 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 EPHA5P54756 1037 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 SEC13P55735 322 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 BTN3A2P78410 334 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 GPR68Q15743 365 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 TOR1AIP1Q5JTV8 583 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 OR4E2Q8NGC2 313 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 OR2A1Q8NGT9 310 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 SUN3Q8TAQ9 357 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 NEIL3Q8TAT5 605 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 SPRYD4Q8WW59 207 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 LRIG1Q96JA1 1093 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 CNTRLQ7Z7A1 2325 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 MDC1Q14676 2089 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 ANKRD34BA5PLL1 514 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 MAN2B1O00754 1011 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 SLC31A1O15431 190 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 MAGEB4O15481 346 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 LGI1O95970 557 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 PDX1P52945 283 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 RPS7P62081 194 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 TGM3Q08188 693 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 GLYR1Q49A26 553 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 IDNKQ5T6J7 187 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 METRNLQ641Q3 311 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 PSRC1Q6PGN9 363 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 PLEKHM3Q6ZWE6 761 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 KIAA0907Q7Z7F0 614 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 CPOQ8IVL8 374 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 CADM2Q8N3J6 435 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 ZNF614Q8N883 585 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 OR4Q3Q8NH05 313 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 SAMD8Q96LT4 415 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 OR7D2Q96RA2 312 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 CITED4Q96RK1 184 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 MRPS30Q9NP92 439 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 NFKBIL1Q9UBC1 381 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 TESQ9UGI8 421 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 GPR34Q9UPC5 381 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 ENTPD4Q9Y227 616 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 CA5BQ9Y2D0 317 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 PCDHGB2Q9Y5G2 931 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 AP1M2Q9Y6Q5 423 aa13.16□□□□□ -0.3
CACNA1A-228ENST00000636610 EDDM13A0A1B0GTR0 161 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 C17orf113A0A1B0GUU1 675 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 POLR1CO15160 346 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 AKR7A2O43488 359 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 IFI30P13284 250 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 S100A1P23297 94 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 VEGFBP49765 207 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 TEKQ02763 1124 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 TATDN3Q17R31 274 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PLET1Q6UQ28 207 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 NUP43Q8NFH3 380 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 TMEM163Q8TC26 289 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 FRMD6Q96NE9 622 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 MOV10Q9HCE1 1003 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 TRANK1O15050 2925 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 FAM240BA0A1B0GVZ2 78 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 CDC42EP2O14613 210 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PRODHO43272 600 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PLOD3O60568 738 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 GYPBP06028 91 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 ACP2P11117 423 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 CPEP16870 476 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 SMIM11AP58511 58 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 SIM1P81133 766 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 REEP5Q00765 189 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 AGERQ15109 404 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 QPRTQ15274 297 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 OCLNQ16625 522 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 FAM78AQ5JUQ0 283 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 TMEM201Q5SNT2 666 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PLBD1Q6P4A8 553 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 LYPD8Q6UX82 237 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 SYT9Q86SS6 491 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 SENP5Q96HI0 755 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 PRRC1Q96M27 445 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 CAMK1GQ96NX5 476 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 QRFPRQ96P65 431 aa13.15□□□□□ -0.3
CACNA1A-228ENST00000636610 MENTQ9BUN1 341 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms