RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	PRNP	P04156	253 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	PFKM	P08237	780 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	CSF1	P09603	554 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	CTRB1	P17538	263 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	AK4	P27144	223 aa	Predicted RBP	10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	SPHAR	Q15513	63 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	C6orf141	Q5SZD1	244 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	CTRB2	Q6GPI1	263 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	IGFN1	Q86VF2	1251 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	AMZ2	Q86W34	360 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	NATD1	Q8N6N6	113 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	CMAS	Q8NFW8	434 aa	Predicted RBP	10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC7A13	Q8TCU3	470 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	SCLY	Q96I15	445 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	FAM103A1	Q9BTL3	118 aa	Known RBP	10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLCO5A1	Q9H2Y9	848 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	ZNF442	Q9H7R0	627 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	PARD6A	Q9NPB6	346 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	KCNIP1	Q9NZI2	227 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	FLVCR2	Q9UPI3	526 aa		10.83	□□□□□ -0.68
SRSF4-208	ENST00000634348	RASAL1	O95294	804 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	POP4	O95707	220 aa	Known RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	POLR2C	P19387	275 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PAX6	P26367	422 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ARSF	P54793	590 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	CARD17	Q5XLA6	110 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	TRAM1L1	Q8N609	369 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	OR13C5	Q8NGS8	318 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PPTC7	Q8NI37	304 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	GPR20	Q99678	358 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PDZD7	Q9H5P4	517 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	RANGRF	Q9HD47	186 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ABI3	Q9P2A4	366 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	GRXCR2	A6NFK2	248 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	MATN3	O15232	486 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	MSC	O60682	206 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	AKAIN1	P0CW23	69 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	NTF3	P20783	257 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	TRHR	P34981	398 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	RPS19	P39019	145 aa	Known RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	CSK	P41240	450 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	LILRA4	P59901	499 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	H3F3A	P84243	136 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	CAP1	Q01518	475 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ERN2	Q76MJ5	926 aa	Known RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	KCNRG	Q8N5I3	272 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348		Q8N9G6	341 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	OR51G2	Q8NGK0	314 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	CD99L2	Q8TCZ2	262 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	TMEM74	Q96NL1	305 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	MUS81	Q96NY9	551 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC32A1	Q9H598	525 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	MYH7	P12883	1935 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PHOX2A	O14813	284 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PRICKLE3	O43900	615 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ADRB1	P08588	477 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	MRPL3	P09001	348 aa	Known RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ACPP	P15309	386 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC24A5	Q71RS6	500 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	IRF2BP1	Q8IU81	584 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	MARC2	Q969Z3	335 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC22A11	Q9NSA0	550 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	BCAS2	O75934	225 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	NFATC1	O95644	943 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	FOXN2	P32314	431 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	THBS2	P35442	1172 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	LIMK1	P53667	647 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PDGFRL	Q15198	375 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	IQCJ	Q1A5X6	159 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	HOXB13	Q92826	284 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	FCRL1	Q96LA6	429 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	MPPED1	O15442	326 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	THBS1	P07996	1170 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	KCTD18	Q6PI47	426 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ABHD15	Q6UXT9	468 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	USP50	Q70EL3	339 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	GPR155	Q7Z3F1	870 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	C14orf80	Q86SX3	495 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	OR9I1	Q8NGQ6	314 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	CNIH3	Q8TBE1	160 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	GHRL	Q9UBU3	117 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	NCOA3	Q9Y6Q9	1424 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	MROH6	A6NGR9	719 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ERI3	O43414	337 aa	Known RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	CDC123	O75794	336 aa	Predicted RBP	10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	TYRP1	P17643	537 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PRPS1L1	P21108	318 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	PRR22	Q8IZ63	422 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	THAP4	Q8WY91	577 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	UPRT	Q96BW1	309 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	CHFR	Q96EP1	664 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	SGCZ	Q96LD1	299 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	TOLLIP	Q9H0E2	274 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	SLC15A5	A6NIM6	579 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	SCD	O00767	359 aa		10.82	□□□□□ -0.68
SRSF4-208	ENST00000634348	ANKRD28	O15084	1053 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms