RNA–Protein interactions for RNA: ENST00000629999.2

DDX49-214, Transcript of DEAD-box helicase 49, humanhuman

TSL 5 BASIC

Gene DDX49, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-214ENST00000629999 OR52J3Q8NH60 311 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 SVIPQ8NHG7 77 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 CYGBQ8WWM9 190 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 ZNF354BQ96LW1 612 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 SPATA5L1Q9BVQ7 753 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 SOX17Q9H6I2 414 aaPredicted RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 MKKSQ9NPJ1 570 aaPredicted RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 THSD1Q9NS62 852 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 RHCGQ9UBD6 479 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 MKL2Q9ULH7 1088 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 FAM32AQ9Y421 112 aaKnown RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 WDR45Q9Y484 360 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 RALGAPA1Q6GYQ0 2036 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 CCDC88CQ9P219 2028 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 TNFRSF10AO00220 468 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 ALPLP05186 524 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 GP1BAP07359 652 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 IFI6P09912 130 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 CD59P13987 128 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 FPR1P21462 350 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 DNAJA1P31689 397 aaKnown RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 EMDP50402 254 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 ARHGDIAP52565 204 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 CDH12P55289 794 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 RHAGQ02094 409 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 PDK3Q15120 406 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 GPR68Q15743 365 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 NNATQ16517 81 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 SMUG1Q53HV7 270 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 NHSL2Q5HYW2 709 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 ZNF311Q5JNZ3 666 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 PRAMEF8Q5VWM4 474 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 PRAMEF7Q5VXH5 474 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 ZCCHC12Q6PEW1 402 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 RBM45Q8IUH3 476 aaKnown RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 NAXDQ8IW45 347 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 AGBL5Q8NDL9 886 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 OR4D11Q8NGI4 311 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 APOBEC4Q8WW27 367 aaKnown RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 RMND5BQ96G75 393 aaPredicted RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 ZNF347Q96SE7 839 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 STACQ99469 402 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 PELOQ9BRX2 385 aaKnown RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 ADI1Q9BV57 179 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 VN1R1Q9GZP7 353 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 DUSP22Q9NRW4 184 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 SLC22A11Q9NSA0 550 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 PDP1Q9P0J1 537 aaPredicted RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 HEMK1Q9Y5R4 338 aaPredicted RBP13.68□□□□□ -0.22
DDX49-214ENST00000629999 ENPP4Q9Y6X5 453 aa13.68□□□□□ -0.22
DDX49-214ENST00000629999 FER1L5A0AVI2 2057 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 DSPPQ9NZW4 1301 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 NPIPA5A0A0B4J1W7 369 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 PRR33A8MZF0 331 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 NPIPA7E9PJI5 369 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 TNFRSF11BO00300 401 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 ADAMDEC1O15204 470 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 DENRO43583 198 aaKnown RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 PRAMEF2O60811 474 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 ZNF806P0C7X5 589 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 PABPC4LP0CB38 370 aaKnown RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 NPIPA8P0DM63 369 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 ZFP36L1Q07352 338 aaKnown RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 ZNHIT3Q15649 155 aaPredicted RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 NSDHLQ15738 373 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 NKAIN1Q4KMZ8 207 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 EXOSC6Q5RKV6 272 aaKnown RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 TYW3Q6IPR3 259 aaKnown RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 TMEM151BQ8IW70 566 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 SDF2Q99470 211 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 PIP5K1AQ99755 562 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 RBM4BQ9BQ04 359 aaKnown RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 RBM4Q9BWF3 364 aaKnown RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 OR10A5Q9H207 317 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 FBXO34Q9NWN3 711 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 IFT80Q9P2H3 777 aaPredicted RBP13.67□□□□□ -0.22
DDX49-214ENST00000629999 PCDHGB3Q9Y5G1 929 aa13.67□□□□□ -0.22
DDX49-214ENST00000629999 IGKV3D-11A0A0A0MRZ8 115 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
DDX49-214ENST00000629999 EPPINO95925 133 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 CCL4P13236 92 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 FUT4P22083 530 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 RNF144AP50876 292 aaPredicted RBP13.66□□□□□ -0.22
DDX49-214ENST00000629999 POU6F2P78424 691 aaPredicted RBP13.66□□□□□ -0.22
DDX49-214ENST00000629999 PPP2R2BQ00005 443 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 IL1RL1Q01638 556 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 MERTKQ12866 999 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 TRA2AQ13595 282 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDX49-214ENST00000629999 ZNF321PQ8N8H1 164 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 OR4N2Q8NGD1 307 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 OR52P1PQ8NH57 321 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 C16orf52Q8NHV5 167 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 PTPMT1Q8WUK0 201 aaPredicted RBP13.66□□□□□ -0.22
DDX49-214ENST00000629999 OR8D2Q9GZM6 311 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 CACYBPQ9HB71 228 aaKnown RBP13.66□□□□□ -0.22
DDX49-214ENST00000629999 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 PCDHGB5Q9Y5G0 923 aa13.66□□□□□ -0.22
DDX49-214ENST00000629999 LYVE1Q9Y5Y7 322 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms