RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 G3V3Y1 287 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 KRT16P08779 473 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 ALOX5P09917 674 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 PIGAP37287 484 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 PNLIPRP2P54317 469 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 FOXK1P85037 733 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 EFR3AQ14156 821 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 DUSP5Q16690 384 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 DECR1Q16698 335 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 TBCELQ5QJ74 424 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 BLOC1S3Q6QNY0 202 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 GK5Q6ZS86 529 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 PIK3R3Q92569 461 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 NR4A3Q92570 626 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 JADE3Q92613 823 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 ADOQ96SZ5 270 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 STACQ99469 402 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 YIPF4Q9BSR8 244 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 INPP5KQ9BT40 448 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 RMND5AQ9H871 391 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 PROK2Q9HC23 129 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 SERHLQ9NQF3 203 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 DUSP22Q9NRW4 184 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 GIN1Q9NXP7 522 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 CCDC167Q9P0B6 97 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 MRTO4Q9UKD2 239 aaKnown RBP18.64■□□□□ 0.57
PTCD3-220ENST00000627371 FAF1Q9UNN5 650 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-220ENST00000627371 NCKAP5O14513 1909 aa18.64■□□□□ 0.57
PTCD3-220ENST00000627371 GXYLT2A0PJZ3 443 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 PINLYPA6NC86 204 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 KCNH1O95259 989 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 CDKN2CP42773 168 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 DNASE1L1P49184 302 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 GYS2P54840 703 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 KCNK10P57789 538 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 MRPS22P82650 360 aaKnown RBP18.63■□□□□ 0.57
PTCD3-220ENST00000627371 DESI1Q6ICB0 168 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 C6orf120Q7Z4R8 191 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 CLEC4FQ8N1N0 589 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 TRIML2Q8N7C3 387 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 VPS33AQ96AX1 596 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 EFHD2Q96C19 240 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-220ENST00000627371 TMCO6Q96DC7 493 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 RMND5BQ96G75 393 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-220ENST00000627371 SLC35G5Q96KT7 338 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 NODALQ96S42 347 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 SLX1AQ9BQ83 275 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 PIGUQ9H490 435 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 VPS4AQ9UN37 437 aa18.63■□□□□ 0.57
PTCD3-220ENST00000627371 CCDC154A6NI56 674 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 RFXANKO14593 260 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 SOX30O94993 753 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 IL33O95760 270 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 ZNF24P17028 368 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 LSP1P33241 339 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 CASP3P42574 277 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 MAN2A2P49641 1150 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 PSMD4P55036 377 aaKnown RBP18.62■□□□□ 0.57
PTCD3-220ENST00000627371 KCNJ2P63252 427 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 ALDH6A1Q02252 535 aaKnown RBP18.62■□□□□ 0.57
PTCD3-220ENST00000627371 SF3A3Q12874 501 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTCD3-220ENST00000627371 AGKQ53H12 422 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 SAXO2Q658L1 398 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 BICRALQ6AI39 1079 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 COX18Q8N8Q8 333 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 ADAMTS15Q8TE58 950 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 C10orf82Q8WW14 230 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 SPDL1Q96EA4 605 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 NEURL3Q96EH8 262 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 OTUB1Q96FW1 271 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-220ENST00000627371 ITCHQ96J02 903 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 SLC35A5Q9BS91 424 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 DOHHQ9BU89 302 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 ANGPTL4Q9BY76 406 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 METTL7AQ9H8H3 244 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 FREM3P0C091 2139 aa18.62■□□□□ 0.57
PTCD3-220ENST00000627371 NR5A2O00482 541 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 CYP4B1P13584 511 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 EDN3P14138 238 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 MATN1P21941 496 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 MST1P26927 711 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 RFC3P40938 356 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 TDGF1P3P51864 188 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 FOXO1Q12778 655 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 SNTA1Q13424 505 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 IGFBP7Q16270 282 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 RNFT1Q5M7Z0 435 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 GALNT11Q8NCW6 608 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 FAM110BQ8TC76 370 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 MIPOL1Q8TD10 442 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 RNF138Q8WVD3 245 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 CDS1Q92903 461 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 NTNG2Q96CW9 530 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 OR7D2Q96RA2 312 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 BTBD2Q9BX70 525 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 TTTY12Q9BZ98 90 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 SERHL2Q9H4I8 314 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 IL1RL2Q9HB29 575 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 SLC52A3Q9NQ40 469 aa18.61■□□□□ 0.57
PTCD3-220ENST00000627371 MRGBPQ9NV56 204 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms