RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 CNIH2Q6PI25 160 aa14.28□□□□□ -0.12
LINC00552-201ENST00000625151 TMEM107Q6UX40 140 aa14.28□□□□□ -0.12
LINC00552-201ENST00000625151 OR4F15Q8NGB8 312 aa14.28□□□□□ -0.12
LINC00552-201ENST00000625151 GNPDA2Q8TDQ7 276 aa14.28□□□□□ -0.12
LINC00552-201ENST00000625151 IRGMA1A4Y4 181 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 OTOL1A6NHN0 477 aaPredicted RBP14.27□□□□□ -0.13
LINC00552-201ENST00000625151 SNTNA6NMZ2 147 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 CLEC3AO75596 197 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 P2RY2P41231 377 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 SLC1A3P43003 542 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 TSPAN31Q12999 210 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 LCN1P1Q5VSP4 162 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 SLC30A6Q6NXT4 461 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 ADAMTSL4Q6UY14 1074 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 ZNF438Q7Z4V0 828 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 VRK2Q86Y07 508 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 ETFBKMTQ8IXQ9 262 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 MRPL43Q8N983 215 aaKnown RBP14.27□□□□□ -0.13
LINC00552-201ENST00000625151 SIMC1Q8NDZ2 872 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 OR8K5Q8NH50 307 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 SLC38A2Q96QD8 506 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 TMED9Q9BVK6 235 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 PPP1R3EQ9H7J1 279 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 POLMQ9NP87 494 aaPredicted RBP14.27□□□□□ -0.13
LINC00552-201ENST00000625151 CLCA2Q9UQC9 943 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 ATG4BQ9Y4P1 393 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 A0A0G2JPF8 293 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 A0A1W2PR48 441 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 HNRNPCL2B2RXH8 293 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 HNRNPCL3B7ZW38 293 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.27□□□□□ -0.13
LINC00552-201ENST00000625151 SLC35G4P0C7Q5 338 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 HNRNPCL4P0DMR1 293 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 EPCAMP16422 314 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 MLLT3P42568 568 aaPredicted RBP14.27□□□□□ -0.13
LINC00552-201ENST00000625151 CDH11P55287 796 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 PPP3R1P63098 170 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 CAMK1Q14012 370 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 ZNF234Q14588 700 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 QPRTQ15274 297 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 ZNF311Q5JNZ3 666 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 PAMR1Q6UXH9 720 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 TMEM64Q6YI46 380 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 Q8N402 240 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 ARIH2OSQ8N7S6 290 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 NLGN4YQ8NFZ3 816 aaPredicted RBP14.27□□□□□ -0.13
LINC00552-201ENST00000625151 OR4Q3Q8NH05 313 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 SOSTQ9BQB4 213 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 TRMT61BQ9BVS5 477 aaKnown RBP14.27□□□□□ -0.13
LINC00552-201ENST00000625151 FAIM2Q9BWQ8 316 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 HDHD5Q9BXW7 423 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 PITHD1Q9GZP4 211 aaPredicted RBP14.27□□□□□ -0.13
LINC00552-201ENST00000625151 TBC1D17Q9HA65 648 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 B3GAT2Q9NPZ5 323 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 CHST2Q9Y4C5 530 aa14.27□□□□□ -0.13
LINC00552-201ENST00000625151 TRDV1A0A1B0GX56 115 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 YES1P07947 543 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 SLC2A2P11168 524 aaPredicted RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 GNSP15586 552 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 HOXD11P31277 338 aaPredicted RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 TRHRP34981 398 aaPredicted RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 BCL6P41182 706 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 VIPR2P41587 438 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 OMPP47874 163 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 CHRNEQ04844 493 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 ZNF155Q12901 538 aaPredicted RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 MLF2Q15773 248 aaPredicted RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 KIAA1161Q6NSJ0 714 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 RASSF6Q6ZTQ3 369 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 POF1BQ8WVV4 589 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 DIO2Q92813 273 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 FERD3LQ96RJ6 166 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 ATF6BQ99941 703 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 SLC38A1Q9H2H9 487 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 EQTNQ9NQ60 294 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 LIPT1Q9Y234 373 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 NTNG1Q9Y2I2 539 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 SCN3AQ9NY46 2000 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 CENPBD1B2RD01 187 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 ERI3O43414 337 aaKnown RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 LATO43561 262 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 ADH1CP00326 375 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 HLA-DQB1P01920 261 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 ACP5P13686 325 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 TRIM23P36406 574 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 MAP2K3P46734 347 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 PRDX1Q06830 199 aaKnown RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 DMPKQ09013 629 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 SLC9A5Q14940 896 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 TRAM2Q15035 370 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 ZNF791Q3KP31 576 aaPredicted RBP14.26□□□□□ -0.13
LINC00552-201ENST00000625151 SNAP47Q5SQN1 464 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 PIP5KL1Q5T9C9 394 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 C18orf63Q68DL7 685 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 CACUL1Q86Y37 369 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 POGLUT1Q8NBL1 392 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 OR2A1Q8NGT9 310 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 SPPL3Q8TCT6 385 aa14.26□□□□□ -0.13
LINC00552-201ENST00000625151 SENP5Q96HI0 755 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms