RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 KIAA1161Q6NSJ0 714 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 TMEM81Q6P7N7 255 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 LYPD4Q6UWN0 246 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 DNAJB7Q7Z6W7 309 aaPredicted RBP13.27□□□□□ -0.29
LDB3-209ENST00000623056 KIAA0907Q7Z7F0 614 aaPredicted RBP13.27□□□□□ -0.29
LDB3-209ENST00000623056 MS4A15Q8N5U1 240 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 FBXO15Q8NCQ5 510 aaPredicted RBP13.27□□□□□ -0.29
LDB3-209ENST00000623056 ZNF740Q8NDX6 193 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 CAPNS2Q96L46 248 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 GSX2Q9BZM3 304 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 BTBD1Q9H0C5 482 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 ABCG4Q9H172 646 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 SERHL2Q9H4I8 314 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 ZDHHC6Q9H6R6 413 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 LYARQ9NX58 379 aaKnown RBP13.27□□□□□ -0.29
LDB3-209ENST00000623056 RDH8Q9NYR8 311 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 PTGFRNQ9P2B2 879 aa13.27□□□□□ -0.29
LDB3-209ENST00000623056 PLXND1Q9Y4D7 1925 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 A0A1W2PPL8 197 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 SOX30O94993 753 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 LATS1O95835 1130 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 NPR2P20594 1047 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 GIFP27352 417 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 SRP54P61011 504 aaKnown RBP13.26□□□□□ -0.29
LDB3-209ENST00000623056 NOGQ13253 232 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 ST3GAL2Q16842 350 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 ZNF322Q6U7Q0 402 aaPredicted RBP13.26□□□□□ -0.29
LDB3-209ENST00000623056 OLIG3Q7RTU3 272 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 ZBTB44Q8NCP5 570 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 OR6T1Q8NGN1 323 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 OR52N1Q8NH53 320 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 CD99L2Q8TCZ2 262 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 RBCK1Q9BYM8 510 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 MAB21L2Q9Y586 359 aa13.26□□□□□ -0.29
LDB3-209ENST00000623056 KHNYNO15037 678 aaKnown RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 CASC3O15234 703 aaKnown RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 NFATC1O95644 943 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 ICAM2P13598 275 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 ACP5P13686 325 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 SDHBP21912 280 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 OR1D2P34982 312 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 MAP2K6P52564 334 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 GBX2P52951 348 aaPredicted RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 DBPQ10586 325 aaPredicted RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 FZD5Q13467 585 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 TAF12Q16514 161 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 GSG1Q2KHT4 349 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 BHLHB9Q6PI77 547 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 SMARCD3Q6STE5 483 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 ARSKQ6UWY0 536 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 CHMP1BQ7LBR1 199 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 BEST4Q8NFU0 473 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 RFKQ969G6 155 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 HHIPL1Q96JK4 782 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 PRRC1Q96M27 445 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 FOPNLQ96NB1 174 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 TMEM175Q9BSA9 504 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 SIRT3Q9NTG7 399 aaPredicted RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 C5AR2Q9P296 337 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 SCP2D1Q9UJQ7 156 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 RASD1Q9Y272 281 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 SLC5A10A0PJK1 596 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 GSAPA4D1B5 854 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 RNF13O43567 381 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 EPPINO95925 133 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 CH25HO95992 272 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 IGHA1P01876 353 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 GALP22466 123 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 AADACL4Q5VUY2 407 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 HACD4Q5VWC8 232 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 HSD11B1LQ7Z5J1 315 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 RASGEF1AQ8N9B8 481 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 SRFBP1Q8NEF9 429 aaKnown RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 GIMAP1Q8WWP7 306 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 ADAMTS14Q8WXS8 1223 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 SMPDL3AQ92484 453 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 DACT3Q96B18 629 aaPredicted RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 WBP1Q96G27 269 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 RADILQ96JH8 1075 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 KLHL15Q96M94 604 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 ZNF578Q96N58 590 aaPredicted RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 CACNG6Q9BXT2 260 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 ISG20L2Q9H9L3 353 aaKnown RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 KCNK12Q9HB15 430 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 CNIH4Q9P003 139 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 LIPT1Q9Y234 373 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 EXOGQ9Y2C4 368 aaKnown RBP13.25□□□□□ -0.29
LDB3-209ENST00000623056 SLC9A8Q9Y2E8 581 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 ANAPC1Q9H1A4 1944 aa13.25□□□□□ -0.29
LDB3-209ENST00000623056 A0A087WUU8 490 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 G3V3Q6 166 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 PPM1BO75688 479 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 ACSM4P0C7M7 580 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 PBLDP30039 288 aaPredicted RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 CCR6P51684 374 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 RNASE12Q5GAN4 147 aaKnown RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 PYHIN1Q6K0P9 492 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 Q6ZNB5 142 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms