RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CPEP16870 476 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 S100A3P33764 101 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 DHPSP49366 369 aaPredicted RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 HTR6P50406 440 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 GZMMP51124 257 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CCR4P51679 360 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CDH12P55289 794 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 RAG2P55895 527 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 PSMA6P60900 246 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 BLOC1S1P78537 153 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 DHODHQ02127 395 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 MAD2L1Q13257 205 aaPredicted RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 UBXN2BQ14CS0 331 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 FNDC3BQ53EP0 1204 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 ANXA8L1Q5VT79 327 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 VHLLQ6RSH7 139 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CILP2Q8IUL8 1156 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 CFAP206Q8IYR0 622 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 KRTCAP2Q8N6L1 136 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 BOLLQ8N9W6 283 aaKnown RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 FAM46DQ8NEK8 389 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 MDGA1Q8NFP4 955 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 ZNF296Q8WUU4 475 aaPredicted RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 C14orf144Q96I85 54 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 MS4A4EQ96PG1 132 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 TEX10Q9NXF1 929 aaPredicted RBP7.48□□□□□ -1.21
VPS11-209ENST00000622309 CHST2Q9Y4C5 530 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 PLEKHM1Q9Y4G2 1056 aa7.48□□□□□ -1.21
VPS11-209ENST00000622309 H7C1Q1 480 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 ZNF593O00488 134 aaPredicted RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 SUV39H1O43463 412 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 ICOSLGO75144 302 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 KHDRBS3O75525 346 aaKnown RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 TLX1P31314 330 aaPredicted RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 PITPNBP48739 271 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 GEMP55040 296 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 PEA15Q15121 130 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 VMACQ2NL98 169 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 IDNKQ5T6J7 187 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 CBLL1Q75N03 491 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 OR5J2Q8NH18 312 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 S100PBPQ96BU1 408 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 SENP5Q96HI0 755 aaPredicted RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 SARS2Q9NP81 518 aaKnown RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 ZNF225Q9UK10 706 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 KCND3Q9UK17 655 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 A0A1B0GVC2 190 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 ABHD14A-ACY1A0A1B0GW23 586 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 TMEM218A2RU14 115 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 A6NIN4 97 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 GABRR3A8MPY1 467 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 FKTNO75072 461 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 MBP02144 154 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 GIPP09681 153 aaPredicted RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 CXCL8P10145 99 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 ACPPP15309 386 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 SDHBP21912 280 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 GKP32189 559 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 SREBF2Q12772 1141 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 MAP4K2Q12851 820 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 OTUD1Q5VV17 481 aaPredicted RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 ACOT1Q86TX2 421 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 FBXO16Q8IX29 292 aaPredicted RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 DEFB106AQ8N104 65 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 ARMC10Q8N2F6 343 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 HDDC3Q8N4P3 179 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 NAXEQ8NCW5 288 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 ZNF671Q8TAW3 534 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 SH3RF2Q8TEC5 729 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 FBXO17Q96EF6 278 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 HPDLQ96IR7 371 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 OSMRQ99650 979 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 CFHR5Q9BXR6 569 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 PORCNQ9H237 461 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 RPF1Q9H9Y2 349 aaKnown RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 PCTPQ9UKL6 214 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 DLGAP4Q9Y2H0 992 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 CHTOPQ9Y3Y2 248 aaKnown RBP7.47□□□□□ -1.21
VPS11-209ENST00000622309 OR10H1Q9Y4A9 318 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 IRAK3Q9Y616 596 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 SSC5DA1L4H1 1573 aa7.47□□□□□ -1.21
VPS11-209ENST00000622309 A0A0U1RQF3 1178 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 C5orf58C9J3I9 102 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 M0QYT0 321 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 RFXANKO14593 260 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 B4GALT5O43286 388 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 MOCS2O96007 188 aaPredicted RBP7.46□□□□□ -1.21
VPS11-209ENST00000622309 TYRP14679 529 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 MUC1P15941 1255 aaPredicted RBP7.46□□□□□ -1.21
VPS11-209ENST00000622309 NOS3P29474 1203 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 PPT1P50897 306 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 RABGGTBP53611 331 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 UBE2IP63279 158 aaKnown RBP7.46□□□□□ -1.21
VPS11-209ENST00000622309 ILF3Q12906 894 aaKnown RBP eCLIP7.46□□□□□ -1.21
VPS11-209ENST00000622309 ILKQ13418 452 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 CAPSQ13938 189 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 TTLL9Q3SXZ7 439 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 HACD4Q5VWC8 232 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 ZNF660Q6AZW8 331 aaPredicted RBP7.46□□□□□ -1.21
VPS11-209ENST00000622309 H3F3CQ6NXT2 135 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms