RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PPP2R2BQ00005 443 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 IRF9Q00978 393 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 IRF8Q02556 426 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 SLAMF1Q13291 335 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 BIKQ13323 160 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 LAPTM5Q13571 262 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 ZNF267Q14586 743 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 GSTA3Q16772 222 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 PRAMEF9Q5VWM5 478 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 FOXB2Q5VYV0 432 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 METTL21CQ5VZV1 264 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 BICRALQ6AI39 1079 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 VASNQ6EMK4 673 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 DGAT2L6Q6ZPD8 337 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 UBE3DQ7Z6J8 389 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 GPSM1Q86YR5 675 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 ST13P4Q8IZP2 240 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 SPATA6LQ8N4H0 392 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 POU5F2Q8N7G0 328 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 MBD3L2Q8NHZ7 208 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 SMPDL3BQ92485 455 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 TANKQ92844 425 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 RIT1Q92963 219 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 STMN2Q93045 179 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 ABTB1Q969K4 478 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 GPR78Q96P69 363 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 NR1H4Q96RI1 486 aaPredicted RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 GPR22Q99680 433 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 MS4A8Q9BY19 250 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 CALHM2Q9HA72 323 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 OXSMQ9NWU1 459 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 GALNT8Q9NY28 637 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 CNOT11Q9UKZ1 510 aaKnown RBP7.15□□□□□ -1.27
CLK1-215ENST00000621181 COL6A5A8TX70 2615 aa7.15□□□□□ -1.27
CLK1-215ENST00000621181 DNHD1Q96M86 4753 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 A0A096LPK6 155 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 A0A1W2PPR1 153 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 ANKRD33BA6NCL7 494 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 H3BNX3 289 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 H7C1Q1 480 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 SMAD7O15105 426 aaKnown RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 PRKRAO75569 313 aaKnown RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 CIB2O75838 187 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 SCELO95171 688 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 IL18BPO95998 194 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 BMP7P18075 431 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 GGT5P36269 586 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 BUD31P41223 144 aaPredicted RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 CDK9P50750 372 aaKnown RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 SLC37A1P57057 533 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 FBXW4P57775 412 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 KLF10Q13118 480 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 CHIT1Q13231 466 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 EBPQ15125 230 aaKnown RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 SLC9B1Q4ZJI4 515 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 HLA-DQA1Q5Y7H0 255 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 C18orf63Q68DL7 685 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 SULT1C3Q6IMI6 304 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 MED27Q6P2C8 311 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 TMEM154Q6P9G4 183 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 ZYG11AQ6WRX3 759 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 TMEM64Q6YI46 380 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 FRMD7Q6ZUT3 714 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 GPR180Q86V85 440 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 RETREG3Q86VR2 466 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 CXorf67Q86X51 503 aaPredicted RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 CIARTQ8N365 385 aaPredicted RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 ZNF781Q8N8C0 355 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 SIMC1Q8NDZ2 872 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 PPP1R14CQ8TAE6 165 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 UBE2E3Q969T4 207 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 WDR34Q96EX3 536 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 COX4I2Q96KJ9 171 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 Q96MF0 132 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 ECSITQ9BQ95 431 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 PELOQ9BRX2 385 aaKnown RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 CENPKQ9BS16 269 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 GATA5Q9BWX5 397 aaPredicted RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 UGT2B28Q9BY64 529 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 DERL2Q9GZP9 239 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 UBQLN3Q9H347 655 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 TEX10Q9NXF1 929 aaPredicted RBP7.14□□□□□ -1.27
CLK1-215ENST00000621181 CD274Q9NZQ7 290 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 JKAMPQ9P055 326 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 NDRG3Q9UGV2 375 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 PHF11Q9UIL8 331 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 ATRQ13535 2644 aa7.14□□□□□ -1.27
CLK1-215ENST00000621181 C2orf92A0A1B0GVN3 265 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 OR6C76A6NM76 312 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 CASQ2O14958 399 aaPredicted RBP7.13□□□□□ -1.27
CLK1-215ENST00000621181 TAPBPO15533 448 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 TRIM13O60858 407 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 S100BP04271 92 aaPredicted RBP7.13□□□□□ -1.27
CLK1-215ENST00000621181 HPNP05981 417 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 COX4I1P13073 169 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 CYP4B1P13584 511 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 NRG3P56975 720 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 RPP38P78345 283 aaKnown RBP7.13□□□□□ -1.27
CLK1-215ENST00000621181 TNFRSF17Q02223 184 aa7.13□□□□□ -1.27
CLK1-215ENST00000621181 DDX39BQ13838 428 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms