RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SUN3Q8TAQ9 357 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 ACOT12Q8WYK0 555 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 ZNF558Q96NG5 402 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 SECISBP2Q96T21 854 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 AIF1LQ9BQI0 150 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 PINK1Q9BXM7 581 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 QRSL1Q9H0R6 528 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 PIGUQ9H490 435 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 HEATR5BQ9P2D3 2071 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 CASC3O15234 703 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 NDUFS4O43181 175 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 SPINT1O43278 529 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 GNSP15586 552 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 SYN1P17600 705 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 PTGER1P34995 402 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 OMPP47874 163 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 TAS2R41P59536 307 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 IDNKQ5T6J7 187 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 KLBQ86Z14 1044 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 ZNF366Q8N895 744 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 RAD51AP1Q96B01 352 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 OR52A5Q9H2C5 316 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 CYSLTR2Q9NS75 346 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 ELF5Q9UKW6 265 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 CBLCQ9ULV8 474 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 PAPLNO95428 1278 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 KELP23276 732 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 BTCP35070 178 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 IFNGR2P38484 337 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 ANGPT1Q15389 498 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 RAET1GQ6H3X3 334 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 ZNF322Q6U7Q0 402 aaPredicted RBP18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 WASH2PQ6VEQ5 465 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 ASB18Q6ZVZ8 466 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 OR5M3Q8NGP4 307 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 IRF7Q92985 503 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 LINC00615Q96LM1 132 aaPredicted RBP18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 SEMA4GQ9NTN9 838 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 MAT2BQ9NZL9 334 aa18.36■□□□□ 0.53
PDLIM3-212ENST00000620787 C17orf113A0A1B0GUU1 675 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 FRS3O43559 492 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 M6PRP20645 277 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 GALP22466 123 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 PER3P56645 1201 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 REEP5Q00765 189 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 TRAM2Q15035 370 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 TOR2AQ5JU69 321 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 BCL2L15Q5TBC7 163 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 OR2L2Q8NH16 312 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 DIO2Q92813 273 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 RGMAQ96B86 450 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 ZFP64Q9NPA5 681 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 WASH6PQ9NQA3 447 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 PCYT1BQ9Y5K3 369 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 A0A0G2JN53 185 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 RGS9O75916 674 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 FGBP02675 491 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 WEE1P30291 646 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 TM4SF4P48230 202 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 MTNR1BP49286 362 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 METAP1P53582 386 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 PRKAG1P54619 331 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 DEFB128Q7Z7B8 93 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 RFT1Q96AA3 541 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 THAP7Q9BT49 309 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 MED28Q9H204 178 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 IMP3Q9NV31 184 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 MRPL39Q9NYK5 338 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 MAFFQ9ULX9 164 aa18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 GPR55Q9Y2T6 319 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-212ENST00000620787 LINC00862A6NCI5 91 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 CPSF4LA6NMK7 179 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 KIAA0355O15063 1070 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 TGM5O43548 720 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 RNF13O43567 381 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 HRO43593 1189 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 LRG1P02750 347 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 EIF4EP06730 217 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 ERGP11308 486 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 PSMB5P28074 263 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 HTR1FP30939 366 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 CA8P35219 290 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 TMEM44Q2T9K0 475 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 HBMQ6B0K9 141 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 SMARCD3Q6STE5 483 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 IL20RBQ6UXL0 311 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 KIAA0907Q7Z7F0 614 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 LRRC28Q86X40 367 aaPredicted RBP18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 TIGD4Q8IY51 512 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 SIX5Q8N196 739 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 DTX3Q8N9I9 347 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 OR11H7Q8NGC8 314 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 KLK6Q92876 244 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 MARVELD3Q96A59 401 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 PHF21AQ96BD5 680 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 CAMK1GQ96NX5 476 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 ARHGDIGQ99819 225 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 DPH7Q9BTV6 452 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 JAM3Q9BX67 310 aa18.34■□□□□ 0.53
PDLIM3-212ENST00000620787 DDX31Q9H8H2 851 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms