RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 HNRNPCL4P0DMR1 293 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 NCK1P16333 377 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 KDELR2P33947 212 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 TRHRP34981 398 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 ACTR3P61158 418 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 RNF4P78317 190 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 POU6F2P78424 691 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF155Q12901 538 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 CLN3Q13286 438 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 IL10RAQ13651 578 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 EBPQ15125 230 aaKnown RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 SYPL1Q16563 259 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 BTBD16Q32M84 506 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 CYP27C1Q4G0S4 372 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 INTS11Q5TA45 600 aaKnown RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 PRAMEF8Q5VWM4 474 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 PRAMEF7Q5VXH5 474 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 HLA-DQA1Q5Y7H0 255 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 LCN8Q6JVE9 175 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 REEP3Q6NUK4 255 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 NPSR1Q6W5P4 371 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 LRRC74BQ6ZQY2 392 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 CCDC80Q76M96 950 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 MRGPREQ86SM8 312 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 SPPL2CQ8IUH8 684 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 SLC44A2Q8IWA5 706 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 C9orf40Q8IXQ3 194 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 C10orf67Q8IYJ2 551 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 COX18Q8N8Q8 333 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF441Q8N8Z8 693 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 C17orf47Q8NEP4 570 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 NFKBIDQ8NI38 313 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 NUBPLQ8TB37 319 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 FBXO30Q8TB52 745 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 FIG4Q92562 907 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 PIK3R3Q92569 461 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 CDS1Q92903 461 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 HSPBAP1Q96EW2 488 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 OTUB1Q96FW1 271 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 TMEM19Q96HH6 336 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 LCORQ96JN0 433 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 ITPAQ9BY32 194 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 WWTR1Q9GZV5 400 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 MTHFD2LQ9H903 347 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF160Q9HCG1 818 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 Q9N2J8 555 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 P4HTMQ9NXG6 502 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 CALML5Q9NZT1 146 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 MAGEL2Q9UJ55 1249 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 DTX4Q9Y2E6 619 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 NUP214P35658 2090 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 TRBV11-1A0A0K0K1C0 115 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 FRG2CA6NGY1 282 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 TMEM200CA6NKL6 621 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 AQP12BA6NM10 295 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 ARPC2O15144 300 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 ACOX3O15254 700 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 PRKNO60260 465 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 FCMRO60667 390 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 STX11O75558 287 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 KCNK2O95069 426 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 IFNA14P01570 189 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 BCHEP06276 602 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CHRM4P08173 479 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 ADRB1P08588 477 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 ETS2P15036 469 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 PIGAP37287 484 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 NR0B1P51843 470 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CRISP3P54108 245 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 POLE2P56282 527 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 PCBP3P57721 371 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 PSPHP78330 225 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 MRPS22P82650 360 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CHRNEQ04844 493 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 DMTNQ08495 405 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 FUT5Q11128 374 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 ELOAQ14241 798 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 FLOT2Q14254 428 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 KPNB1Q14974 876 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CRTC2Q53ET0 693 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 GPAT3Q53EU6 434 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CRB2Q5IJ48 1285 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 DCST2Q5T1A1 773 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 CYP2R1Q6VVX0 501 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 C16orf62Q7Z3J2 963 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 PATL1Q86TB9 770 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 VASH2Q86V25 355 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 AQP12AQ8IXF9 295 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 EID3Q8N140 333 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 OR4N2Q8NGD1 307 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 THAP4Q8WY91 577 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 PMM1Q92871 262 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 POP5Q969H6 163 aaKnown RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 LRGUKQ96M69 825 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 FER1L6-AS2Q96M78 137 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 NSMCE2Q96MF7 247 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 GAL3ST4Q96RP7 486 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 TREX2Q9BQ50 279 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-209ENST00000620393 DEFB126Q9BYW3 111 aa7.42□□□□□ -1.22
CPNE3-209ENST00000620393 DPH1Q9BZG8 443 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms