RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 CNIH4Q9P003 139 aa14.7□□□□□ -0.06
CPSF1-213ENST00000620219 MRTO4Q9UKD2 239 aaKnown RBP14.7□□□□□ -0.06
CPSF1-213ENST00000620219 NDUFB5O43674 189 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 SLC35F1Q5T1Q4 408 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 CYP4Z2PQ8N1L4 340 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 OR6T1Q8NGN1 323 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 SLC38A2Q96QD8 506 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 ZNF717Q9BY31 904 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-213ENST00000620219 TMEM38AQ9H6F2 299 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 TRBV4-1A0A0J9YWV2 114 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 DLGAP1O14490 977 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 PABPC4LP0CB38 370 aaKnown RBP14.69□□□□□ -0.06
CPSF1-213ENST00000620219 PAICSP22234 425 aaKnown RBP14.69□□□□□ -0.06
CPSF1-213ENST00000620219 FASLGP48023 281 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 PMS2P3Q13401 168 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 SLC34A3Q8N130 599 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 SLC25A45Q8N413 288 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 IQCF1Q8N6M8 205 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 ZG16BQ96DA0 208 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 SLC35A4Q96G79 324 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 PRRG3Q9BZD7 231 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 PCED1AQ9H1Q7 454 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 DNAJC27Q9NZQ0 273 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 COMMD3-BMI1R4GMX3 469 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 LILRA5A6NI73 299 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 C9J4A7 227 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 SCDO00767 359 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 FOLR1P15328 257 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 MAP2K4P45985 399 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 KCNJ10P78508 379 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 MAP4K2Q12851 820 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 APLFQ8IW19 511 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-213ENST00000620219 ADOQ96SZ5 270 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 SLC6A14Q9UN76 642 aa14.69□□□□□ -0.06
CPSF1-213ENST00000620219 A0A1W2PR77 199 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 GXYLT2A0PJZ3 443 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 A6NCN8 305 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 CASC3O15234 703 aaKnown RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 TBX6O95947 436 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 CHRM4P08173 479 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 IFI30P13284 250 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 GZMMP51124 257 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 GPLD1P80108 840 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 TCEANCQ8N8B7 351 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 OR51A7Q8NH64 312 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 DAZLQ92904 295 aaKnown RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 NCDNQ9UBB6 729 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 EFCAB7A8K855 629 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 H0YAE9 185 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 TLX2O43763 284 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 PRICKLE3O43900 615 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 CCL7P80098 99 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 PDZK1Q5T2W1 519 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 PPP1R3BQ86XI6 285 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 ADAMTS16Q8TE57 1224 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 JSRP1Q96MG2 331 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 COPS4Q9BT78 406 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 PRODH2Q9UF12 536 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 RGS10O43665 173 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 SLC25A12O75746 678 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 PPP2R2BQ00005 443 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 TOP3AQ13472 1001 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 NPTX1Q15818 432 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 NIPAL1Q6NVV3 410 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 NT5CQ8TCD5 201 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 CRB3Q9BUF7 120 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 ERVK-18Q9QC07 812 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 NTNG1Q9Y2I2 539 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 IFT52Q9Y366 437 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 PRAMEF2O60811 474 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 PCBP4P57723 403 aaKnown RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 TRAM2Q15035 370 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 IFI44Q8TCB0 444 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 SFXN5Q8TD22 340 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 C11orf24Q96F05 449 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 FAM46AQ96IP4 442 aaKnown RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 ART5Q96L15 291 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 FCRL1Q96LA6 429 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 DACH2Q96NX9 599 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 NIPSNAP1Q9BPW8 284 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 DUSP15Q9H1R2 295 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 LYRM4Q9HD34 91 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 SIRT3Q9NTG7 399 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-213ENST00000620219 SIRT5Q9NXA8 310 aa14.68□□□□□ -0.06
CPSF1-213ENST00000620219 NPIPB8E9PQR5 432 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 HCRTR2O43614 444 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 NUDT21O43809 227 aaKnown RBP14.67□□□□□ -0.06
CPSF1-213ENST00000620219 PRSS23O95084 383 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 PSMD4P55036 377 aaKnown RBP14.67□□□□□ -0.06
CPSF1-213ENST00000620219 RAB39AQ14964 217 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 MICAQ29983 383 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 PLK5Q496M5 336 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 RHNO1Q9BSD3 238 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 PTGFRNQ9P2B2 879 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 SNTNA6NMZ2 147 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 PEX12O00623 359 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 CTNSO60931 367 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 INAVAQ3KP66 663 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 NRMQ8IXM6 262 aa14.67□□□□□ -0.06
CPSF1-213ENST00000620219 ZNF595Q8IYB9 648 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms