RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 RBM48Q5RL73 367 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 C1orf189Q5VU69 101 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 XAF1Q6GPH4 301 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 TMEM71Q6P5X7 295 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 B3GNT8Q7Z7M8 397 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 LACC1Q8IV20 430 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 SPARTQ8N0X7 666 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 OR10G2Q8NGC3 310 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 OR52R1Q8NGF1 315 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 OR4D11Q8NGI4 311 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 OR4C15Q8NGM1 316 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF675Q8TD23 568 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 GIPC3Q8TF64 312 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 APOBEC4Q8WW27 367 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 PIK3R3Q92569 461 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 RIT1Q92963 219 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZG16BQ96DA0 208 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 NRBF2Q96F24 287 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 DGAT2Q96PD7 388 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 NIPSNAP1Q9BPW8 284 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 BTBD2Q9BX70 525 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 CCDC90BQ9GZT6 254 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF768Q9H5H4 540 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 SERTAD3Q9UJW9 196 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 A0A087WV62 115 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 A0A1W2PQM1 296 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF749O43361 778 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 DPM1O60762 260 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 UGT2B11O75310 529 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 SEMA7AO75326 666 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 GADD45GO95257 159 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 CPNE6O95741 557 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ANGPTL1O95841 491 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 AGR2O95994 175 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 IFNA16P05015 189 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ALOX5P09917 674 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 RHCEP18577 417 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 AVPR2P30518 371 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 PGDP52209 483 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 RPP38P78345 283 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 DAB2P98082 770 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 MGAT2Q10469 447 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 NPRL3Q12980 569 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 BIKQ13323 160 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF311Q5JNZ3 666 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 BROXQ5VW32 411 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 MED25Q71SY5 747 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 VRK2Q86Y07 508 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 TAGAPQ8N103 731 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 GPR151Q8TDV0 419 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 PHF10Q8WUB8 498 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 C12orf43Q96C57 262 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 DCUN1D5Q9BTE7 237 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 CALML5Q9NZT1 146 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 PCDHGA5Q9Y5G8 931 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 HRKO00198 91 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 FFAR1O14842 300 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ABCB7O75027 752 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 SOX30O94993 753 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZIC2O95409 532 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 CBX7O95931 251 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ANKRD34CP0C6C1 535 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 RYKP34925 604 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 RFX3P48380 749 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 DUSP3P51452 185 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ROR2Q01974 943 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 MINDY4Q4G0A6 757 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 FGD3Q5JSP0 725 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 PRAMEF8Q5VWM4 474 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 PRAMEF7Q5VXH5 474 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 NLGN4XQ8N0W4 816 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 COX18Q8N8Q8 333 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 CDRT4Q8N9R6 151 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 GTPBP3Q969Y2 492 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 CNPPD1Q9BV87 410 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 DGCR6LQ9BY27 220 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 LHPPQ9H008 270 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 PIGUQ9H490 435 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 ACER3Q9NUN7 267 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 NDRG4Q9ULP0 352 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 WDR45Q9Y484 360 aa11.84□□□□□ -0.51
TNFAIP3-209ENST00000619035 M0R129 80 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 TRMUO75648 421 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF883P0CG24 379 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 SSTR4P31391 388 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF267Q14586 743 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ANGPT1Q15389 498 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 GPR68Q15743 365 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 TCEAL6Q6IPX3 200 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 HEPHL1Q6MZM0 1159 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 IFI44Q8TCB0 444 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 TCEAL3Q969E4 200 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 CTHRC1Q96CG8 243 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF501Q96CX3 271 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 SLC7A5P2Q9GIP4 190 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 NECTIN3Q9NQS3 549 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 CTPS2Q9NRF8 586 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ERVK-18Q9QC07 812 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 SLC13A4Q9UKG4 626 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms