RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 SLC9B1Q4ZJI4 515 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 PDCD4Q53EL6 469 aaKnown RBP7.55□□□□□ -1.2
NEK3-209ENST00000618856 NHSL2Q5HYW2 709 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 EMC4Q5J8M3 183 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 PRAMEF20Q5VT98 475 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 BICRALQ6AI39 1079 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 TIGD3Q6B0B8 471 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 ARHGAP11AQ6P4F7 1023 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 TRILQ7L0X0 811 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 SLC44A2Q8IWA5 706 aaPredicted RBP7.55□□□□□ -1.2
NEK3-209ENST00000618856 PRR22Q8IZ63 422 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 WDSUB1Q8N9V3 476 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 FAM13CQ8NE31 585 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 NUP43Q8NFH3 380 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 GOT1L1Q8NHS2 421 aaPredicted RBP7.55□□□□□ -1.2
NEK3-209ENST00000618856 PRR7Q8TB68 274 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 SFXN5Q8TD22 340 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 MOAP1Q96BY2 351 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 PPP1R36Q96LQ0 422 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 MAGEB18Q96M61 343 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 RILPQ96NA2 401 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 MS4A4EQ96PG1 132 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 OR52B2Q96RD2 323 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 ADOQ96SZ5 270 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 STACQ99469 402 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 TSPAN10Q9H1Z9 355 aaPredicted RBP7.55□□□□□ -1.2
NEK3-209ENST00000618856 C3orf14Q9HBI5 128 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 NEUROD4Q9HD90 331 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 SLCO1B3Q9NPD5 702 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 SDR39U1Q9NRG7 319 aaPredicted RBP7.55□□□□□ -1.2
NEK3-209ENST00000618856 DUSP22Q9NRW4 184 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 MARCOQ9UEW3 520 aaPredicted RBP7.55□□□□□ -1.2
NEK3-209ENST00000618856 CBLCQ9ULV8 474 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 BOKQ9UMX3 212 aaPredicted RBP7.55□□□□□ -1.2
NEK3-209ENST00000618856 OSGIN2Q9Y236 505 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 C15orf41Q9Y2V0 281 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 PCDHGB3Q9Y5G1 929 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 HRH3Q9Y5N1 445 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 USH1CQ9Y6N9 552 aa7.55□□□□□ -1.2
NEK3-209ENST00000618856 IGLV3-32A0A0A0MS00 114 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 A0A1B0GTH9 108 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 PRSS51A0A1B0GVH4 220 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 OR14I1A6ND48 311 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 PRAMEF25A6NGN4 478 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 ACOT7O00154 380 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 AQP7O14520 342 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 LRRTM2O43300 516 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 ATP8B1O43520 1251 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 SOX30O94993 753 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 C6orf47O95873 294 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 HMGN2P05204 90 aaKnown RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 GUSBP08236 651 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 CELA3AP09093 270 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 KITP10721 976 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 ACP2P11117 423 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 CYP4B1P13584 511 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 IDO1P14902 403 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 ENDOUP21128 410 aaKnown RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 ELAVL4P26378 380 aaKnown RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 LCN1P31025 176 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 GPC1P35052 558 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 KIR3DL1P43629 444 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 CLNS1AP54105 237 aaKnown RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 UFM1P61960 85 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 KCNJ2P63252 427 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 MRPS22P82650 360 aaKnown RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 PRR5P85299 388 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 HSF1Q00613 529 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 RBPJQ06330 500 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 ZNF155Q12901 538 aaPredicted RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 C3AR1Q16581 482 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 DUSP5Q16690 384 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 GSTA3Q16772 222 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.54□□□□□ -1.2
NEK3-209ENST00000618856 VPS26BQ4G0F5 336 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 TMEM198Q66K66 360 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 CDC73Q6P1J9 531 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 DOLPP1Q86YN1 238 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 GOLGA6L1Q8N7Z2 621 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 GLB1L3Q8NCI6 653 aaPredicted RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 SLC16A11Q8NCK7 471 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 OR5M3Q8NGP4 307 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 FAM57AQ8TBR7 257 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 MIPOL1Q8TD10 442 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 LRRC8CQ8TDW0 803 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 SSC4DQ8WTU2 575 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 PHF10Q8WUB8 498 aaKnown RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 TMCO6Q96DC7 493 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 C16orf58Q96GQ5 468 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 CCDC115Q96NT0 180 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 DMRTA2Q96SC8 542 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 DOHHQ9BU89 302 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 DPY30Q9C005 99 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 PIGUQ9H490 435 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 Q9N2J8 555 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 INTS9Q9NV88 658 aaKnown RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 BTNL2Q9UIR0 455 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 ABCG2Q9UNQ0 655 aa7.54□□□□□ -1.2
NEK3-209ENST00000618856 MRPS18CQ9Y3D5 142 aaKnown RBP7.54□□□□□ -1.2
NEK3-209ENST00000618856 LIPGQ9Y5X9 500 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms