RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 SCARF1Q14162 830 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 C16orf72Q14CZ0 275 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 N4BP2L1Q5TBK1 243 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 LIPMQ5VYY2 423 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 FAM91A1Q658Y4 838 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 LPCAT3Q6P1A2 487 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF790Q6PG37 636 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 DLEU7Q6UYE1 221 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SCD5Q86SK9 330 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TMEM135Q86UB9 458 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 FAM129CQ86XR2 697 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PARP8Q8N3A8 854 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CADM2Q8N3J6 435 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 OR51L1Q8NGJ5 315 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 STOML3Q8TAV4 291 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PIGTQ969N2 578 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MISP3Q96FF7 219 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CERS2Q96G23 380 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 WDFY2Q96P53 400 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MCCC1Q96RQ3 725 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 WDR77Q9BQA1 342 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TMEM109Q9BVC6 243 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 STRADBQ9C0K7 418 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SMYD3Q9H7B4 428 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TMEM9Q9P0T7 183 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 UPB1Q9UBR1 384 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 GPR160Q9UJ42 338 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SERTAD3Q9UJW9 196 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MRPS33Q9Y291 106 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 DRG1Q9Y295 367 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SLC27A6Q9Y2P4 619 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PRG3Q9Y2Y8 225 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 GMNCA6NCL1 334 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CCDC160A6NGH7 325 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TUBAL3A6NHL2 446 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 G3V2T6 193 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 LAMTOR5O43504 91 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SCO1O75880 301 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 RPLP2P05387 115 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 DRD1P21728 446 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TGM2P21980 687 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 ACKR3P25106 362 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CSKP41240 450 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 VIPR2P41587 438 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 WASP42768 502 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MRPS22P82650 360 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PITPNAQ00169 270 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 DMWDQ09019 674 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MESP2Q0VG99 397 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 DNASE1L3Q13609 305 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PDE7AQ13946 482 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MPPED2Q15777 294 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 ATP6AP1Q15904 470 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF528Q3MIS6 628 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PPM1LQ5SGD2 360 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SLC35F1Q5T1Q4 408 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CFAP77Q6ZQR2 320 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 C1orf229Q6ZS94 237 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 LINC00299Q6ZSB3 139 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TCF24Q7RTU0 167 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MRPL52Q86TS9 123 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TSPAN33Q86UF1 283 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 APCDD1Q8J025 514 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF276Q8N554 614 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 EIF4E3Q8N5X7 224 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TEX26Q8N6G2 289 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CLDN22Q8N7P3 220 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 WDSUB1Q8N9V3 476 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CLEC1AQ8NC01 280 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 FAM71CQ8NEG0 241 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 OR1M1Q8NGA1 313 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 OR4M2Q8NGB6 313 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 OR51D1Q8NGF3 324 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 OR51A7Q8NH64 312 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 RHEBL1Q8TAI7 183 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 IGDCC4Q8TDY8 1250 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SCARB1Q8WTV0 552 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SFT2D1Q8WV19 159 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SORCS1Q8WY21 1168 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CCDC124Q96CT7 223 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 CMTM5Q96DZ9 223 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 ALKBH3Q96Q83 286 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 IL12RB2Q99665 862 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TMEM43Q9BTV4 400 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MND1Q9BWT6 205 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SRRQ9GZT4 340 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 MIXL1Q9H2W2 232 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 ANKRD19PQ9H560 264 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TLE6Q9H808 572 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 AKIRIN1Q9H9L7 192 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PLEKHA2Q9HB19 425 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PPANQ9NQ55 473 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 NIT2Q9NQR4 276 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 ACSS1Q9NUB1 689 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 RSL24D1Q9UHA3 163 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 PRPF19Q9UMS4 504 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 OAS3Q9Y6K5 1087 aaKnown RBP3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 USP47Q96K76 1375 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 TRBV7-9A0A0J9YWB2 115 aa3.82□□□□□ -1.8
UBE2D3-233ENST00000618836 SDR42E2A6NKP2 422 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms