RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CPSF4LA6NMK7 179 aaKnown RBP16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 H3BMQ9 156 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF701M0R085 212 aaPredicted RBP16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 MAN1A2O60476 641 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLITRK5O94991 958 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 CBX7O95931 251 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 OSMP13725 252 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 ITIH1P19827 911 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 CTSKP43235 329 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 EPHA4P54764 986 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 TAS2R41P59536 307 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 DUSP8Q13202 625 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 FAM53BQ14153 422 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 INAVAQ3KP66 663 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 DCST2Q5T1A1 773 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 ALDH16A1Q8IZ83 802 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 DEPDC4Q8N2C3 294 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 VWA5B2Q8N398 1253 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 COX18Q8N8Q8 333 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR4K5Q8NGD3 323 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF420Q8TAQ5 688 aaPredicted RBP16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 GPR151Q8TDV0 419 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 FAR1Q8WVX9 515 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 COG8Q96MW5 612 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 AMBNQ9NP70 447 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 EPHA6Q9UF33 1036 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 NTNG1Q9Y2I2 539 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 NSA2O95478 260 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 GABRB1P18505 474 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 MASP1P48740 699 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 SKP1P63208 163 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 AMZ1Q400G9 498 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 ERI1Q8IV48 349 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLC35F3Q8IY50 421 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 PEX5LQ8IYB4 626 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 MORN4Q8NDC4 146 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR52R1Q8NGF1 315 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 MMABQ96EY8 250 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 CNDP2Q96KP4 475 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 DOK1Q99704 481 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF350Q9GZX5 532 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 TRIM45Q9H8W5 580 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 CAPN10Q9HC96 672 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 DUSP22Q9NRW4 184 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 TMEM184BQ9Y519 407 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 VCANP13611 3396 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 IGHV1OR21-1A0A087WYE8 117 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 HRO43593 1189 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 RGS10O43665 173 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 ATE1O95260 518 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 CNR2P34972 360 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 TRHRP34981 398 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 NUDT6P53370 316 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 GP2P55259 537 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 RGS8P57771 180 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 CDC42P60953 191 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 BTG2P78543 158 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF155Q12901 538 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 TUBA3CQ13748 450 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 CCDC81Q6ZN84 652 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF836Q6ZNA1 936 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 RAB33BQ9H082 229 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 POLR2J3Q9H1A7 115 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 C11orf16Q9NQ32 467 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 KLHL28Q9NXS3 571 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 IFT52Q9Y366 437 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 PCDHGB1Q9Y5G3 927 aa16.16■□□□□ 0.18
PCDHGC3-205ENST00000617641 NPIPA5A0A0B4J1W7 369 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 GXYLT2A0PJZ3 443 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 NPIPA7E9PJI5 369 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 TMX2-CTNND1H3BSU7 103 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 NTN1O95631 604 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 FADS2O95864 444 aaKnown RBP16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 CCNYL3P0C7X3 344 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 NPIPA8P0DM63 369 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 MMP11P24347 488 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 GABRA3P34903 492 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 MAP3K8P41279 467 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 SEPHS1P49903 392 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 RNF144AP50876 292 aaPredicted RBP16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 CFHR1Q03591 330 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 STX4Q12846 297 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 MAPK14Q16539 360 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 FIGNL1Q6PIW4 674 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZER1Q7Z7L7 766 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 Q8N9G6 341 aaPredicted RBP16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR6C4Q8NGE1 309 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZFAND2BQ8WV99 257 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 DIO2Q92813 273 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 STACQ99469 402 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 CACYBPQ9HB71 228 aaKnown RBP16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 CCNB1IP1Q9NPC3 277 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 PRTFDC1Q9NRG1 225 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 SEMA4GQ9NTN9 838 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 CACNA1IQ9P0X4 2223 aa16.15■□□□□ 0.18
PCDHGC3-205ENST00000617641 AGAP5A6NIR3 686 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 STX11O75558 287 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 GIMD1P0DJR0 217 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 S1PR1P21453 382 aa16.14■□□□□ 0.18
PCDHGC3-205ENST00000617641 MAP4K2Q12851 820 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms