RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 OR6C4Q8NGE1 309 aa4.34□□□□□ -1.72
CHD9-221ENST00000615216 OR52E2Q8NGJ4 325 aa4.34□□□□□ -1.72
CHD9-221ENST00000615216 OR14K1Q8NGZ2 314 aa4.34□□□□□ -1.72
CHD9-221ENST00000615216 CNOT9Q92600 299 aaKnown RBP4.34□□□□□ -1.72
CHD9-221ENST00000615216 DPH2Q9BQC3 489 aaPredicted RBP4.34□□□□□ -1.72
CHD9-221ENST00000615216 IL23AQ9NPF7 189 aa4.34□□□□□ -1.72
CHD9-221ENST00000615216 NHSQ6T4R5 1651 aa4.34□□□□□ -1.72
CHD9-221ENST00000615216 DDX60LQ5H9U9 1706 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 HCRTO43612 131 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 KCNK5O95279 499 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 P04436 131 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ETFAP13804 333 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TUBG1P23258 451 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 GATMP50440 423 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 INHBCP55103 352 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SLC26A5P58743 744 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SLC10A2Q12908 348 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 CST6Q15828 149 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 RAET1LQ5VY80 246 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CARD17Q5XLA6 110 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PLAG1Q6DJT9 500 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 Q6ZVL8 140 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 DPPA4Q7L190 304 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CNTN4Q8IWV2 1026 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 OR5W2Q8NH69 310 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TRMT10AQ8TBZ6 339 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 RNF128Q8TEB7 428 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TMEM68Q96MH6 324 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 DHRS4Q9BTZ2 278 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 POLE4Q9NR33 117 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CNOT2Q9NZN8 540 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 SLC6A14Q9UN76 642 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CACNG2Q9Y698 323 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 A0A1W2PP55 124 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CSF2P04141 144 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 STSP08842 583 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SOX2P48431 317 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 STK19P49842 368 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 HNRNPKP61978 463 aaKnown RBP eCLIP4.33□□□□□ -1.725e-7■■■■□ 21.9
CHD9-221ENST00000615216 SH3BP2P78314 561 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PSPHP78330 225 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 LRP8Q14114 963 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PTPRCAPQ14761 206 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SIX1Q15475 284 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 TMEM53Q6P2H8 277 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PGM2L1Q6PCE3 622 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 MRPL10Q7Z7H8 261 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 WDTC1Q8N5D0 677 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 FOXRED1Q96CU9 486 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 MSANTD3Q96H12 275 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TGM7Q96PF1 710 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 OR1F2PQ96R84 312 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 LHPPQ9H008 270 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 GORASP2Q9H8Y8 452 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 GIMAP2Q9UG22 337 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ENTPD2Q9Y5L3 495 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 RBBP6Q7Z6E9 1792 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 WASH4PA8MWX3 477 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CLIC3O95833 236 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 IFNA4P05014 189 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 AKAIN1P0CW23 69 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 HTR2BP41595 481 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CAMLGP49069 296 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 HNRNPFP52597 415 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 RAB40BQ12829 278 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SF3A2Q15428 464 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 RGNQ15493 299 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 DEFB134Q4QY38 66 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 NDUFAF5Q5TEU4 345 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 DNAAF1Q8NEP3 725 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ZNF417Q8TAU3 575 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 JPH3Q8WXH2 748 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 SORCS1Q8WY21 1168 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 BORCS7Q96B45 105 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PRRC1Q96M27 445 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 PRRT1Q99946 306 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CPEB1Q9BZB8 566 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 ZNF442Q9H7R0 627 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 DCAF13Q9NV06 445 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 ZNF226Q9NYT6 803 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 GGT3PA6NGU5 568 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 C12orf71A8MTZ7 269 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 F5H5P2 479 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 POLR1CO15160 346 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 SMAD9O15198 467 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 PAK4O96013 591 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 SYN1P17600 705 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 FUT4P22083 530 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 S100A7P31151 101 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SELENOWP63302 87 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 SNTB2Q13425 540 aaKnown RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 ATAD3CQ5T2N8 411 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 CCBE1Q6UXH8 406 aaPredicted RBP4.33□□□□□ -1.72
CHD9-221ENST00000615216 KLHDC8AQ8IYD2 350 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 OR10T2Q8NGX3 314 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TMEM174Q8WUU8 243 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 TMEM19Q96HH6 336 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ARL6Q9H0F7 186 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 ABCG5Q9H222 651 aa4.33□□□□□ -1.72
CHD9-221ENST00000615216 B3GNT3Q9Y2A9 372 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms