RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TMED10P49755 219 aaKnown RBP13.58□□□□□ -0.24
CD48-203ENST00000613788 SSR4P51571 173 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 MRPS22P82650 360 aaKnown RBP13.58□□□□□ -0.24
CD48-203ENST00000613788 LIPEQ05469 1076 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 RBBP4Q09028 425 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 ZSCAN26Q16670 478 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 ARHGAP11BQ3KRB8 267 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 SAMD4BQ5PRF9 694 aaKnown RBP13.58□□□□□ -0.24
CD48-203ENST00000613788 B3GNTL1Q67FW5 361 aaPredicted RBP13.58□□□□□ -0.24
CD48-203ENST00000613788 HEPHL1Q6MZM0 1159 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 OPN5Q6U736 354 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 C16orf47Q6ZP98 133 aaPredicted RBP13.58□□□□□ -0.24
CD48-203ENST00000613788 SLC34A3Q8N130 599 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 METTL25Q8N6Q8 603 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 CHDHQ8NE62 594 aaPredicted RBP13.58□□□□□ -0.24
CD48-203ENST00000613788 OR4N2Q8NGD1 307 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 RMND5BQ96G75 393 aaPredicted RBP13.58□□□□□ -0.24
CD48-203ENST00000613788 ZNF583Q96ND8 569 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 RASL10BQ96S79 203 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 G6PC3Q9BUM1 346 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 ALG2Q9H553 416 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 TMEM38AQ9H6F2 299 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 A4GALTQ9NPC4 353 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 GPR83Q9NYM4 423 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 CALML5Q9NZT1 146 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 PRPF19Q9UMS4 504 aaKnown RBP13.58□□□□□ -0.24
CD48-203ENST00000613788 CELSR3Q9NYQ7 3312 aa13.58□□□□□ -0.24
CD48-203ENST00000613788 DMXL2Q8TDJ6 3036 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 GXYLT2A0PJZ3 443 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 REM1O75628 298 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 CEACAM4O75871 244 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 KCNK2O95069 426 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 ALPPP05187 535 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 TFPTP0C1Z6 253 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 ABCD3P28288 659 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 SOX11P35716 441 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 GZMMP51124 257 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 PLCXD2Q0VAA5 305 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 ZNF630Q2M218 657 aaPredicted RBP13.57□□□□□ -0.24
CD48-203ENST00000613788 GPAT3Q53EU6 434 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 DCST2Q5T1A1 773 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 ERICH5Q6P6B1 374 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 ISLR2Q6UXK2 745 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 NET1Q7Z628 596 aaPredicted RBP13.57□□□□□ -0.24
CD48-203ENST00000613788 IFNEQ86WN2 208 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 CALHM3Q86XJ0 350 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 SLC30A8Q8IWU4 369 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 DND1Q8IYX4 353 aaKnown RBP13.57□□□□□ -0.24
CD48-203ENST00000613788 C10orf111Q8N326 155 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 TMEM156Q8N614 296 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 BCORP1Q8N888 145 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 C11orf65Q8NCR3 313 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 TNIP2Q8NFZ5 429 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 OR2T12Q8NG77 320 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 FAM110BQ8TC76 370 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 ASB15Q8WXK1 588 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 TMBIM1Q969X1 311 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 REXO5Q96IC2 774 aaKnown RBP13.57□□□□□ -0.24
CD48-203ENST00000613788 TRNT1Q96Q11 434 aaKnown RBP13.57□□□□□ -0.24
CD48-203ENST00000613788 LMF1Q96S06 567 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 SDF2Q99470 211 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 PIF1Q9H611 641 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 ZNF552Q9H707 407 aaPredicted RBP13.57□□□□□ -0.24
CD48-203ENST00000613788 ZMIZ1Q9ULJ6 1067 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 ZNF451Q9Y4E5 1061 aa13.57□□□□□ -0.24
CD48-203ENST00000613788 FAM220BPB1ANY3 271 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 C5orf58C9J3I9 102 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 SLC28A2O43868 658 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 ABCB7O75027 752 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 STX11O75558 287 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 DNAJC8O75937 253 aaPredicted RBP13.56□□□□□ -0.24
CD48-203ENST00000613788 NADKO95544 446 aaPredicted RBP13.56□□□□□ -0.24
CD48-203ENST00000613788 IL33O95760 270 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 ITGB2P05107 769 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 NUDT7P0C024 238 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 ARAFP10398 606 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 ATP6V1C1P21283 382 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 IL12BP29460 328 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 LCN1P31025 176 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 CRISP3P54108 245 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 PNLIPRP2P54317 469 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 HPCAP84074 193 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 CDK6Q00534 326 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 RAPSNQ13702 412 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 ADRM1Q16186 407 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 FIGNL1Q6PIW4 674 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 PRR22Q8IZ63 422 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 FDCSPQ8NFU4 85 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 SLC38A5Q8WUX1 472 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 DIO2Q92813 273 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 OMA1Q96E52 524 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 THTPAQ9BU02 230 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 POLE3Q9NRF9 147 aa13.56□□□□□ -0.24
CD48-203ENST00000613788 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.56□□□□□ -0.24
CD48-203ENST00000613788 ELOVL7A1L3X0 281 aa13.55□□□□□ -0.24
CD48-203ENST00000613788 GSC2O15499 205 aa13.55□□□□□ -0.24
CD48-203ENST00000613788 MAN1A2O60476 641 aa13.55□□□□□ -0.24
CD48-203ENST00000613788 PPM1BO75688 479 aa13.55□□□□□ -0.24
CD48-203ENST00000613788 BCHEP06276 602 aa13.55□□□□□ -0.24
CD48-203ENST00000613788 GUSBP08236 651 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms