RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 USP53Q70EK8 1073 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 PTRH1Q86Y79 214 aaKnown RBP13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 CYB561A3Q8NBI2 242 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 OR4K5Q8NGD3 323 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 NXPE3Q969Y0 559 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 FBRSQ9HAH7 460 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 TREM1Q9NP99 234 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 NLKQ9UBE8 527 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 APOBEC3BQ9UH17 382 aaKnown RBP13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 AHSA1O95433 338 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 HTR1AP08908 422 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 POLR2IP36954 125 aaKnown RBP13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 GABARAPL2P60520 117 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 POU6F2P78424 691 aaPredicted RBP13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 CBLL1Q75N03 491 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 ZNF527Q8NB42 609 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 OR8J2Q8NGG1 315 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 OSTF1Q92882 214 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 ZNF700Q9H0M5 742 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 LAMP5Q9UJQ1 280 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 GMEB2Q9UKD1 530 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 SCO2O43819 266 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 FMO6PO60774 539 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 CSTAP01040 98 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 HCKP08631 526 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 SPARCP09486 303 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 ZNF806P0C7X5 589 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 F8A1P23610 371 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 STOMP27105 288 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 CERS1P27544 350 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 PRDX1Q06830 199 aaKnown RBP13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 ABCA11PQ4W5N1 156 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 GKN2Q86XP6 184 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 POLDIP3Q9BY77 421 aaKnown RBP13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 RLN2P04090 185 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 MAPK14Q16539 360 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 ACOT4Q8N9L9 421 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 ABHD11Q8NFV4 315 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 NR4A3Q92570 626 aa13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 HEMK1Q9Y5R4 338 aaPredicted RBP13.62□□□□□ -0.23
NDFIP2-205ENST00000612570 CLEC3AO75596 197 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 CSTBP04080 98 aaKnown RBP13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 CAPNS1P04632 268 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 ALPLP05186 524 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 PLPP6Q8IY26 295 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 FANK1Q8TC84 345 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 GRHPRQ9UBQ7 328 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 SCML1Q9UN30 329 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 SH3PXD2BA1X283 911 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 M0R3H8 397 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 KLK8O60259 260 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 TRAPPC6AO75865 159 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 IFNA7P01567 189 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 DRD5P21918 477 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 SLC6A6P31641 620 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 UQCRC1P31930 480 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 PAMR1Q6UXH9 720 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 SLC29A4Q7RTT9 530 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 MINDY2Q8NBR6 621 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 GALNT11Q8NCW6 608 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 S100A16Q96FQ6 103 aaKnown RBP13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 ACTL8Q9H568 366 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 OR2S2Q9NQN1 319 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 KANTRA0A1W2PQU2 76 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 PRRT4C9JH25 899 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 NPIPA5E9PKD4 350 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 ZNF670-ZNF695F2Z2N8 137 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 PLATP00750 562 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 ADAP00813 363 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 PEPDP12955 493 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 PORP16435 677 aaPredicted RBP13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 CRYZQ08257 329 aaKnown RBP13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 DEFB110Q30KQ9 67 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 PROX2Q3B8N5 592 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 MEDAGQ5VYS4 303 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 FAM219BQ5XKK7 198 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 LRFN4Q6PJG9 635 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 DLEU7Q6UYE1 221 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 GPALPP1Q8IXQ4 340 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 METTL4Q8N3J2 472 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 OR2T33Q8NG76 320 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 OR5D16Q8NGK9 328 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 WDR20Q8TBZ3 569 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 HCAR2Q8TDS4 363 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 UHRF1Q96T88 793 aaPredicted RBP13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 GTPBP2Q9BX10 602 aaKnown RBP13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 TPSD1Q9BZJ3 242 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 C8orf33Q9H7E9 229 aaPredicted RBP13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 SACM1LQ9NTJ5 587 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 NPIPA1Q9UND3 350 aa13.61□□□□□ -0.23
NDFIP2-205ENST00000612570 TEX13DA0A0J9YY54 714 aaPredicted RBP13.6□□□□□ -0.23
NDFIP2-205ENST00000612570 A0A1B0GVC2 190 aa13.6□□□□□ -0.23
NDFIP2-205ENST00000612570 A6NIN4 97 aa13.6□□□□□ -0.23
NDFIP2-205ENST00000612570 SOBPA7XYQ1 873 aa13.6□□□□□ -0.23
NDFIP2-205ENST00000612570 FXYD1O00168 92 aa13.6□□□□□ -0.23
NDFIP2-205ENST00000612570 RFXAPO00287 272 aa13.6□□□□□ -0.23
NDFIP2-205ENST00000612570 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
NDFIP2-205ENST00000612570 HMGN2P05204 90 aaKnown RBP13.6□□□□□ -0.23
NDFIP2-205ENST00000612570 THEGLP0DJG4 465 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms