RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 ALPPP05187 535 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 ETS2P15036 469 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 HOXB6P17509 224 aaKnown RBP13.71□□□□□ -0.21
CIT-219ENST00000612548 OR1E2P47887 323 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 SLC37A1P57057 533 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 NCF4Q15080 339 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 TYW3Q6IPR3 259 aaKnown RBP13.71□□□□□ -0.21
CIT-219ENST00000612548 GPR32P1Q8NGA4 272 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 WDR36Q8NI36 951 aaKnown RBP13.71□□□□□ -0.21
CIT-219ENST00000612548 EME1Q96AY2 570 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 ART5Q96L15 291 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 SDF2Q99470 211 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 RSPO3Q9BXY4 272 aaPredicted RBP13.71□□□□□ -0.21
CIT-219ENST00000612548 WDR54Q9H977 334 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 NXT1Q9UKK6 140 aaKnown RBP13.71□□□□□ -0.21
CIT-219ENST00000612548 AK5Q9Y6K8 562 aa13.71□□□□□ -0.21
CIT-219ENST00000612548 DIRAS1O95057 198 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 AK1P00568 194 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 RFX3P48380 749 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 ZNF517Q6ZMY9 492 aaPredicted RBP13.71□□□□□ -0.22
CIT-219ENST00000612548 KBTBD2Q8IY47 623 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 OR4N2Q8NGD1 307 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 RASSF5Q8WWW0 418 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 GEMIN6Q8WXD5 167 aaKnown RBP13.71□□□□□ -0.22
CIT-219ENST00000612548 ZG16BQ96DA0 208 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 CIB1Q99828 191 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 BDH2Q9BUT1 245 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 SPATA5L1Q9BVQ7 753 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 NUDT9Q9BW91 350 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 KLHL4Q9C0H6 718 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 ZNF350Q9GZX5 532 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 VCX3BQ9H321 246 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 FBXO34Q9NWN3 711 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 FOXJ2Q9P0K8 574 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 COPS7AQ9UBW8 275 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 BAG5Q9UL15 447 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 SH3GLB1Q9Y371 365 aa13.71□□□□□ -0.22
CIT-219ENST00000612548 CNOT1A5YKK6 2376 aaKnown RBP13.7□□□□□ -0.22
CIT-219ENST00000612548 GNGT2O14610 69 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 PRKNO60260 465 aaPredicted RBP13.7□□□□□ -0.22
CIT-219ENST00000612548 BRINP1O60477 761 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 KCNK2O95069 426 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 DLGAP3O95886 979 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 FESP07332 822 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 CT45A8P0DMV1 189 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 CT45A9P0DMV2 189 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 TRHRP34981 398 aaPredicted RBP13.7□□□□□ -0.22
CIT-219ENST00000612548 KCNJ5P48544 419 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 TARDBPQ13148 414 aaKnown RBP eCLIP13.7□□□□□ -0.223e-6■■■■□ 20.8
CIT-219ENST00000612548 GPR68Q15743 365 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 CT45A2Q5DJT8 189 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 C6orf15Q6UXA7 325 aaPredicted RBP13.7□□□□□ -0.22
CIT-219ENST00000612548 TIPARPQ7Z3E1 657 aaKnown RBP13.7□□□□□ -0.22
CIT-219ENST00000612548 VRK2Q86Y07 508 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 MARCH9Q86YJ5 346 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 EPHX4Q8IUS5 362 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 AMER2Q8N7J2 671 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 OR1N1Q8NGS0 311 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 PROX1Q92786 737 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 C8orf44Q96CB5 159 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 C7orf34Q96L11 122 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 SLC46A1Q96NT5 459 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 NTN4Q9HB63 628 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 Q9N2J8 555 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 DNAJB9Q9UBS3 223 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 CFL2Q9Y281 166 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 PTRH2Q9Y3E5 179 aaKnown RBP13.7□□□□□ -0.22
CIT-219ENST00000612548 OR10H1Q9Y4A9 318 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 DTNAQ9Y4J8 743 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 PCDHGA3Q9Y5H0 932 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 SDK2Q58EX2 2172 aa13.7□□□□□ -0.22
CIT-219ENST00000612548 NPIPA5A0A0B4J1W7 369 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 PRAMEF25A6NGN4 478 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 SAGE2PA6NJ88 616 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 NPIPA7E9PJI5 369 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 STX11O75558 287 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 PABPC4LP0CB38 370 aaKnown RBP13.69□□□□□ -0.22
CIT-219ENST00000612548 NPIPA8P0DM63 369 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 CSRP1P21291 193 aaKnown RBP13.69□□□□□ -0.22
CIT-219ENST00000612548 ZNF311Q5JNZ3 666 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 TMEM164Q5U3C3 297 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 PAPD4Q6PIY7 484 aaKnown RBP13.69□□□□□ -0.22
CIT-219ENST00000612548 IZUMO2Q6UXV1 221 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 CPEB2Q7Z5Q1 589 aaKnown RBP13.69□□□□□ -0.22
CIT-219ENST00000612548 COMTD1Q86VU5 262 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 C9orf40Q8IXQ3 194 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 ZNF619Q8N2I2 560 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 MORN4Q8NDC4 146 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 OR52P1PQ8NH57 321 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 TMBIM1Q969X1 311 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 ZNF354BQ96LW1 612 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 BTBD9Q96Q07 612 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 GAL3ST4Q96RP7 486 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 C19orf25Q9UFG5 118 aaPredicted RBP13.69□□□□□ -0.22
CIT-219ENST00000612548 PADI1Q9ULC6 663 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 OAZ3Q9UMX2 235 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 PADI2Q9Y2J8 665 aa13.69□□□□□ -0.22
CIT-219ENST00000612548 TTC36A6NLP5 189 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 PDLIM1O00151 329 aa13.68□□□□□ -0.22
CIT-219ENST00000612548 SEC24DO94855 1032 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms