RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 ABTB1Q969K4 478 aaPredicted RBP16.6■□□□□ 0.25
VCX3A-203ENST00000612369 UGT2B28Q9BY64 529 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 OR2B2Q9GZK3 357 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 TUBB1Q9H4B7 451 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 REEP4Q9H6H4 257 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 NPDC1Q9NQX5 325 aaPredicted RBP16.6■□□□□ 0.25
VCX3A-203ENST00000612369 SLC17A7Q9P2U7 560 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 MRTO4Q9UKD2 239 aaKnown RBP16.6■□□□□ 0.25
VCX3A-203ENST00000612369 MAPRE3Q9UPY8 281 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 SLC6A5Q9Y345 797 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 MRPS18CQ9Y3D5 142 aaKnown RBP16.6■□□□□ 0.25
VCX3A-203ENST00000612369 WIF1Q9Y5W5 379 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 PTGDR2Q9Y5Y4 395 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 ARHGAP21Q5T5U3 1957 aa16.6■□□□□ 0.25
VCX3A-203ENST00000612369 C2orf72A6NCS6 295 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 LSM1O15116 133 aaKnown RBP16.59■□□□□ 0.25
VCX3A-203ENST00000612369 CHRNGP07510 517 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 LINC00032P0C843 101 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 CAPN3P20807 821 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 TIMP3P35625 211 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 ASMTP46597 345 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 UGT3A2Q3SY77 523 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 RFTN2Q52LD8 501 aaPredicted RBP16.59■□□□□ 0.25
VCX3A-203ENST00000612369 DMRTC2Q8IXT2 367 aaPredicted RBP16.59■□□□□ 0.25
VCX3A-203ENST00000612369 ZFP28Q8NHY6 868 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 TWIST2Q8WVJ9 160 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 MTERF3Q96E29 417 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 LURAP1Q96LR2 239 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 MECRQ9BV79 373 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 C3orf14Q9HBI5 128 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 Q9N2J8 555 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 SERHLQ9NQF3 203 aa16.59■□□□□ 0.25
VCX3A-203ENST00000612369 INTS1Q8N201 2190 aaKnown RBP16.58■□□□□ 0.25
VCX3A-203ENST00000612369 CD8B2A6NJW9 211 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 PDPK1O15530 556 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 NME6O75414 186 aaPredicted RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 CPN1P15169 458 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 SDC1P18827 310 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 SRD5A2P31213 254 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 CEACAM8P31997 349 aaPredicted RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 PSMD4P55036 377 aaKnown RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 RPL38P63173 70 aaKnown RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 DECR1Q16698 335 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 NSUN5P2Q63ZY6 315 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 ENPP6Q6UWR7 440 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 SEM1Q6ZVN7 128 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 YRDCQ86U90 279 aaKnown RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 DDIASQ8IXT1 998 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 OR4N2Q8NGD1 307 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 OR14L1PQ8NHC6 308 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 GFM2Q969S9 779 aaKnown RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 EFHD2Q96C19 240 aaPredicted RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 PPCDCQ96CD2 204 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 ZBED6CLQ96FA7 236 aaPredicted RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 WDYHV1Q96HA8 205 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 PPP3R2Q96LZ3 170 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 LMF2Q9BU23 707 aaKnown RBP16.58■□□□□ 0.24
VCX3A-203ENST00000612369 CBLCQ9ULV8 474 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 ABCG2Q9UNQ0 655 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 CAMK2AQ9UQM7 478 aa16.58■□□□□ 0.24
VCX3A-203ENST00000612369 TMEM114B3SHH9 223 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 DVL2O14641 736 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 TYROBPO43914 113 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 IL2RAP01589 272 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 CYP4B1P13584 511 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 MAPK1P28482 360 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 FRKP42685 505 aaPredicted RBP16.57■□□□□ 0.24
VCX3A-203ENST00000612369 TLE4Q04727 773 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 PDE7AQ13946 482 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 SH2D4BQ5SQS7 431 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 LRIG3Q6UXM1 1119 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 R3HCC1LQ7Z5L2 792 aaKnown RBP16.57■□□□□ 0.24
VCX3A-203ENST00000612369 IFNEQ86WN2 208 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 LIX1LQ8IVB5 337 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 CEP70Q8NHQ1 597 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 ZPLD1Q8TCW7 415 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 TSSK3Q96PN8 268 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 PARD6BQ9BYG5 372 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 CALHM2Q9HA72 323 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 MCCC2Q9HCC0 563 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 SDHAF3Q9NRP4 125 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 ACSS1Q9NUB1 689 aaPredicted RBP16.57■□□□□ 0.24
VCX3A-203ENST00000612369 ZNF629Q9UEG4 869 aaPredicted RBP16.57■□□□□ 0.24
VCX3A-203ENST00000612369 KCNN3Q9UGI6 736 aa16.57■□□□□ 0.24
VCX3A-203ENST00000612369 TMEM233B4DJY2 109 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 PIP5K1BO14986 540 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 IL33O95760 270 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 BPGMP07738 259 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 PRPS2P11908 318 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 GRK2P25098 689 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 EVI2BP34910 448 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 GPC1P35052 558 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 RPL3P39023 403 aaKnown RBP16.56■□□□□ 0.24
VCX3A-203ENST00000612369 PEX19P40855 299 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 CLK3P49761 638 aaKnown RBP16.56■□□□□ 0.24
VCX3A-203ENST00000612369 GAS1P54826 345 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 MANFP55145 182 aaKnown RBP16.56■□□□□ 0.24
VCX3A-203ENST00000612369 GAB1Q13480 694 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 RCAN2Q14206 197 aa16.56■□□□□ 0.24
VCX3A-203ENST00000612369 KRT71Q3SY84 523 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms