RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SMIM11AP58511 58 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 CSNK1G2P78368 415 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 TGM3Q08188 693 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 GPR68Q15743 365 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 NDUFA5Q16718 116 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 FAM92BQ6ZTR7 304 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 FAM26EQ8N5C1 309 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 WDR34Q96EX3 536 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SLC38A2Q96QD8 506 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 INSM2Q96T92 566 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-207ENST00000612273 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-207ENST00000612273 ICKQ9UPZ9 632 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 HSPB11Q9Y547 144 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 ALG5Q9Y673 324 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 HMX3A6NHT5 357 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 GYPBP06028 91 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 HTR2BP41595 481 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 MAP2K3P46734 347 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 TAS2R38P59533 333 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 ELOAQ14241 798 aaKnown RBP13.19□□□□□ -0.3
COL6A1-207ENST00000612273 PLK5Q496M5 336 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 PLBD1Q6P4A8 553 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 XKRXQ6PP77 449 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 ARL9Q6T311 187 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 DNAJC5GQ8N7S2 189 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 CYB561A3Q8NBI2 242 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 KCT2Q8NC54 265 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SAMD8Q96LT4 415 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 IRF2BPLQ9H1B7 796 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SYNPO2LQ9H987 977 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 ENTPD4Q9Y227 616 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 A0A1W2PRQ8 180 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 GNB5O14775 395 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 PRODHO43272 600 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 IL1AP01583 271 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 BCL6P41182 706 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 P2RY2P41231 377 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SLC1A3P43003 542 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 KLHL22Q53GT1 634 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SLC36A4Q6YBV0 504 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 FBXL6Q8N531 539 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 ACOT4Q8N9L9 421 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SLC16A11Q8NCK7 471 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 MORN4Q8NDC4 146 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SETD7Q8WTS6 366 aaKnown RBP13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SUSD6Q92537 303 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 CERS4Q9HA82 394 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 SPHK1Q9NYA1 384 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 GRIP1Q9Y3R0 1128 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 IGKV1-8A0A0C4DH67 115 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 A0A0G2JMP0 313 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 CENPVL1A0A0U1RR11 272 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 A0A0X1KG70 313 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 A8MVJ9 347 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 CPEP16870 476 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 CPN2P22792 545 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 SLC3A1Q07837 685 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 ZNF658BQ4V348 819 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-207ENST00000612273 CCDC58Q4VC31 144 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 OR4M2Q8NGB6 313 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 OR4Q3Q8NH05 313 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 OR5K2Q8NHB8 316 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 TMEM163Q8TC26 289 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 SENP5Q96HI0 755 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-207ENST00000612273 DPEP2Q9H4A9 486 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 TESQ9UGI8 421 aaKnown RBP13.18□□□□□ -0.3
COL6A1-207ENST00000612273 TEKT2Q9UIF3 430 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 TRAPPC4Q9Y296 219 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 IQCMA0A1B0GVH7 501 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 LRIT2A6NDA9 550 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 GABRPO00591 440 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 SERPINI2O75830 405 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 AIFM1O95831 613 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 ACP2P11117 423 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 CCL5P13501 91 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 IL12RB1P42701 662 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 SRP54P61011 504 aaKnown RBP13.18□□□□□ -0.3
COL6A1-207ENST00000612273 BTN3A2P78410 334 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 CDK3Q00526 305 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 TEKQ02763 1124 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 OCLNQ16625 522 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 RPTNQ6XPR3 784 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 ERN2Q76MJ5 926 aaKnown RBP13.18□□□□□ -0.3
COL6A1-207ENST00000612273 OR10H4Q8NGA5 316 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 MCHR1Q99705 422 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 DPH1Q9BZG8 443 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 DKK3Q9UBP4 350 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 SERGEFQ9UGK8 458 aa13.18□□□□□ -0.3
COL6A1-207ENST00000612273 UBXN7O94888 489 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 LGI1O95970 557 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 YES1P07947 543 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 SYPP08247 313 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ITGB7P26010 798 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 ACVR1BP36896 505 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 DDOSTP39656 456 aa13.17□□□□□ -0.3
COL6A1-207ENST00000612273 GPLD1P80108 840 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms