RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 LRRC61Q9BV99 259 aa11.17□□□□□ -0.62
USP6NL-206ENST00000609853 TEX12Q9BXU0 123 aa11.17□□□□□ -0.62
USP6NL-206ENST00000609853 WDR12Q9GZL7 423 aaKnown RBP11.17□□□□□ -0.62
USP6NL-206ENST00000609853 ZNF350Q9GZX5 532 aa11.17□□□□□ -0.62
USP6NL-206ENST00000609853 ARMC7Q9H6L4 198 aa11.17□□□□□ -0.62
USP6NL-206ENST00000609853 LMAN1LQ9HAT1 526 aa11.17□□□□□ -0.62
USP6NL-206ENST00000609853 KRCC1Q9NPI7 259 aaPredicted RBP11.17□□□□□ -0.62
USP6NL-206ENST00000609853 C11orf16Q9NQ32 467 aa11.17□□□□□ -0.62
USP6NL-206ENST00000609853 FBXL21Q9UKT6 434 aa11.17□□□□□ -0.62
USP6NL-206ENST00000609853 A3GALT2U3KPV4 340 aa11.17□□□□□ -0.62
USP6NL-206ENST00000609853 TDRD6O60522 2096 aaKnown RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 A0A087WUU8 490 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 A0A1B0GVG6 124 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 HYKKA2RU49 373 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 LILRA5A6NI73 299 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 AGAP5A6NIR3 686 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 CLDN25C9JDP6 229 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 M0R082 166 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 AIREO43918 545 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 FCMRO60667 390 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 ENTPD6O75354 484 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 SOX14O95416 240 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 CSF2P04141 144 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 RPLP0P05388 317 aaKnown RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 CELA2BP08218 269 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 NME1P15531 152 aaKnown RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 TNNI3P19429 210 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 RPS4Y1P22090 263 aaKnown RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 CSTF2P33240 577 aaKnown RBP eCLIP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 LIPAP38571 399 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 PCYT1AP49585 367 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 VSX2P58304 361 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 DUSP5Q16690 384 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 PRICKLE4Q2TBC4 344 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 ZNF542PQ5EBM4 170 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 ZNF730Q6ZMV8 503 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 RASSF6Q6ZTQ3 369 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 MRGPREQ86SM8 312 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 OR4N5Q8IXE1 308 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 NLGN4XQ8N0W4 816 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 ZNF619Q8N2I2 560 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 C19orf47Q8N9M1 422 aaKnown RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 TEX47Q8TBZ9 253 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 FNDC8Q8TC99 324 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 CTHRC1Q96CG8 243 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 ZHX1-C8orf76Q96EF9 292 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 TCTN2Q96GX1 697 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 TMEM80Q96HE8 168 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 KLHL25Q9H0H3 589 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 QRSL1Q9H0R6 528 aaKnown RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 TTYH1Q9H313 450 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 UBE2ZQ9H832 354 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 FBXO8Q9NRD0 319 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 MKLN1Q9UL63 735 aa11.16□□□□□ -0.62
USP6NL-206ENST00000609853 MRPS2Q9Y399 296 aaKnown RBP11.16□□□□□ -0.62
USP6NL-206ENST00000609853 METTL12A8MUP2 240 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 FGF17O60258 216 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 FMO6PO60774 539 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 COQ9O75208 318 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 UBXN7O94888 489 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 ACP2P11117 423 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 NT5EP21589 574 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 CDH3P22223 829 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 NR4A1P22736 598 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 FPR3P25089 353 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 CD38P28907 300 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 MAP3K8P41279 467 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 STAT5AP42229 794 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 RGS6P49758 472 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 VBP1P61758 197 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 SHC2P98077 582 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 FOXD4Q12950 439 aaPredicted RBP11.15□□□□□ -0.62
USP6NL-206ENST00000609853 GINS1Q14691 196 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 TMEM44Q2T9K0 475 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 PRTGQ2VWP7 1150 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 TRMT12Q53H54 448 aaKnown RBP11.15□□□□□ -0.62
USP6NL-206ENST00000609853 ARMCX4Q5H9R4 360 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 SLC27A4Q6P1M0 643 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 PLEKHM3Q6ZWE6 761 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 USP43Q70EL4 1123 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 OLIG3Q7RTU3 272 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 ADCK1Q86TW2 530 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 RANBP3LQ86VV4 465 aaPredicted RBP11.15□□□□□ -0.62
USP6NL-206ENST00000609853 MCATQ8IVS2 390 aaKnown RBP11.15□□□□□ -0.62
USP6NL-206ENST00000609853 KBTBD8Q8NFY9 601 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 NDNFQ8TB73 568 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 HOXB13Q92826 284 aaPredicted RBP11.15□□□□□ -0.62
USP6NL-206ENST00000609853 OSTF1Q92882 214 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 ZG16BQ96DA0 208 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 SH3YL1Q96HL8 342 aaPredicted RBP11.15□□□□□ -0.62
USP6NL-206ENST00000609853 PLEKHA8Q96JA3 519 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 SLC6A18Q96N87 628 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 DACH2Q96NX9 599 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 SLC38A2Q96QD8 506 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 IL4I1Q96RQ9 567 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 MCHR1Q99705 422 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 CHRNA10Q9GZZ6 450 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 OCEL1Q9H607 264 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 ANKRA2Q9H9E1 313 aa11.15□□□□□ -0.62
USP6NL-206ENST00000609853 NLGN3Q9NZ94 848 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms