RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SBSNQ6UWP8 590 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 Q6ZSR9 355 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 MEX3DQ86XN8 651 aaKnown RBP13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 THAP6Q8TBB0 222 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 ISL2Q96A47 359 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 ALOXE3Q9BYJ1 711 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 VNN3Q9NY84 501 aa13.48□□□□□ -0.25
PCDHB16-201ENST00000609684 LAMB1P07942 1786 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 C13orf42A0A1B0GVH6 325 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 ZNF217O75362 1048 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 PPP1R3DO95685 299 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 SGCAQ16586 387 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 PIWIL3Q7Z3Z3 882 aaKnown RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 MS4A15Q8N5U1 240 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 METTL25Q8N6Q8 603 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CYB561A3Q8NBI2 242 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CASTOR1Q8WTX7 329 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 EPHA6Q9UF33 1036 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 DISC1C4P0D8 188 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 BOLA2-SMG1P6H3BVE0 249 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 POLR1CO15160 346 aaPredicted RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CASC3O15234 703 aaKnown RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 RBBP9O75884 186 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 NUDT7P0C024 238 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 E2F1Q01094 437 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 LEG1Q6P5S2 330 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CYP4V2Q6ZWL3 525 aaPredicted RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 PIAS4Q8N2W9 510 aaPredicted RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 OR2L8Q8NGY9 312 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 SUN5Q8TC36 379 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 ACOT12Q8WYK0 555 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 KCMF1Q9P0J7 381 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 NUMA1Q14980 2115 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 GPR89AB7ZAQ6 455 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 H3BQ06 376 aaPredicted RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 PRKYO43930 277 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 GPR89BP0CG08 455 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 HOXC5Q00444 222 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CARD17Q5XLA6 110 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 ZC3H14Q6PJT7 736 aaKnown RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 RTL10Q7L3V2 364 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 STX12Q86Y82 276 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 AKAP1Q92667 903 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CREB3L1Q96BA8 519 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 PITHD1Q9GZP4 211 aaPredicted RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 FBXO9Q9UK97 447 aaPredicted RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CSNK1G3Q9Y6M4 447 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CNTRLQ7Z7A1 2325 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 NPIPA5A0A0B4J1W7 369 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 C12orf71A8MTZ7 269 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 NPIPA7E9PJI5 369 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 NPIPA8P0DM63 369 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 OPRL1P41146 370 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 FCRLBQ6BAA4 426 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 VWA5B2Q8N398 1253 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CCDC115Q96NT0 180 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 BCL7BQ9BQE9 202 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 CPPED1Q9BRF8 314 aaPredicted RBP13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 C12orf4Q9NQ89 552 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 STARD5Q9NSY2 213 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 OR6C2Q9NZP2 312 aa13.47□□□□□ -0.25
PCDHB16-201ENST00000609684 SCN7AQ01118 1682 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 C7orf72A4D263 438 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 SGK494L7N484 410 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 GTF2F2P13984 249 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 HIST1H1TP22492 207 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 IMPA1P29218 277 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 DUSP3P51452 185 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 WNT4P56705 351 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 CTXN1P60606 82 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 GGTA1PQ4G0N0 100 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 PLAG1Q6DJT9 500 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 KCTD9Q7L273 389 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 WDR53Q7Z5U6 358 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 LILRA2Q8N149 483 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 ANKLE1Q8NAG6 615 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 TOR1AIP2Q8NFQ8 470 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 OR2T4Q8NH00 348 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 CPNE2Q96FN4 548 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 SPATA6Q9NWH7 488 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 KLHL21Q9UJP4 597 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 TEX13DA0A0J9YY54 714 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 ZSCAN5BA6NJL1 495 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 NPIPA2E9PIF3 369 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 NPIPA3F8WFD2 350 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 LDB3O75112 727 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 ARNTP27540 789 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 LCN1P31025 176 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 MAGEA8P43361 318 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 FAM78AQ5JUQ0 283 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 CHDHQ8NE62 594 aaPredicted RBP13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 CCDC54Q8NEL0 328 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 B3GNT7Q8NFL0 401 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 OR4C15Q8NGM1 316 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 CCDC120Q96HB5 630 aa13.46□□□□□ -0.25
PCDHB16-201ENST00000609684 ATG5Q9H1Y0 275 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms