RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 C18orf63Q68DL7 685 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 CDPF1Q6NVV7 123 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 H3F3CQ6NXT2 135 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 CEACAM20Q6UY09 585 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 GOLGA7Q7Z5G4 137 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 NKAIN4Q8IVV8 208 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 CFAP206Q8IYR0 622 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 MEIOBQ8N635 442 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 C1orf52Q8N6N3 182 aaKnown RBP11.85□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF614Q8N883 585 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 OR6J1Q8NGC5 347 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 OR52I1Q8NGK6 324 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 PPTC7Q8NI37 304 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 NPY6RQ99463 290 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 COPS8Q99627 209 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 POLDIP3Q9BY77 421 aaKnown RBP11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DERL2Q9GZP9 239 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 NSUN3Q9H649 340 aaKnown RBP11.85□□□□□ -0.51
CTCFL-218ENST00000608440 IPPKQ9H8X2 491 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 LRTM1Q9HBL6 345 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 CCL27Q9Y4X3 112 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 A0A1B0GW55 424 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 PPEF2O14830 753 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 KHDRBS3O75525 346 aaKnown RBP11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DUX4L2P0CJ85 424 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DUX4L3P0CJ86 424 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DUX4L4P0CJ87 422 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DUX4L5P0CJ88 424 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 NR2F6P10588 404 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 NQO2P16083 231 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 UGT2B7P16662 529 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 TACR1P25103 407 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 E2F1Q01094 437 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DHODHQ02127 395 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 SLC9B2Q86UD5 537 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 ZBTB8OSQ8IWT0 167 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 RGL4Q8IZJ4 473 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 ARRDC1Q8N5I2 433 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 ZSCAN1Q8NBB4 408 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 OR4C15Q8NGM1 316 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 NELL1Q92832 810 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 FATE1Q969F0 183 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 SMAD5Q99717 465 aaKnown RBP11.85□□□□□ -0.51
CTCFL-218ENST00000608440 MAPKAP1Q9BPZ7 522 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 FUZQ9BT04 418 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 AARSD1Q9BTE6 412 aaKnown RBP11.85□□□□□ -0.51
CTCFL-218ENST00000608440 GGACTQ9BVM4 153 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 WDR26Q9H7D7 661 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 CYSLTR2Q9NS75 346 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
CTCFL-218ENST00000608440 CXorf65A6NEN9 183 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 TCAPO15273 167 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 STX11O75558 287 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 IGHA2P01877 340 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF44P15621 663 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 CTGFP29279 349 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 RAD52P43351 418 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 EFNA5P52803 228 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 WNT4P56705 351 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 LAMTOR4Q0VGL1 99 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 DUSP28Q4G0W2 176 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 ATP13A5Q4VNC0 1218 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 KIAA1211LQ6NV74 962 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 RHOUQ7L0Q8 258 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 SSX6Q7RTT6 188 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 NR2C2APQ86WQ0 139 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 OR5M3Q8NGP4 307 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 CMTM3Q96MX0 182 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 DOHHQ9BU89 302 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 DDIT4Q9NX09 232 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 NINQ8N4C6 2090 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 URADA6NGE7 173 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 SLC9B1P1A6NJY1 282 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 FPGTO14772 594 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 TLX2O43763 284 aaPredicted RBP11.84□□□□□ -0.51
CTCFL-218ENST00000608440 EBLN1P0CF75 366 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 RPS14P62263 151 aaKnown RBP11.84□□□□□ -0.51
CTCFL-218ENST00000608440 ZNF155Q12901 538 aaPredicted RBP11.84□□□□□ -0.51
CTCFL-218ENST00000608440 ILKQ13418 452 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 ASPGQ86U10 573 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 IQCF1Q8N6M8 205 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 OR13C4Q8NGS5 318 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 EEF1AKMT1Q8WVE0 214 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 TLNRD1Q9H1K6 362 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 C2orf42Q9NWW7 574 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 TAS2R13Q9NYV9 303 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 TVP23BQ9NYZ1 205 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 PISDQ9UG56 409 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 PPT2Q9UMR5 302 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 CBY1Q9Y3M2 126 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 ARL5AQ9Y689 179 aa11.84□□□□□ -0.51
CTCFL-218ENST00000608440 SOX30O94993 753 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 GUCA1CO95843 209 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 GP1BAP07359 652 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 CELP19835 753 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 CNR1P21554 472 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 GABRA5P31644 462 aa11.83□□□□□ -0.52
CTCFL-218ENST00000608440 TMEM132DQ14C87 1099 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms