RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 DKK1O94907 266 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 CLPSP04118 112 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 IGKV3-11P04433 115 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 CD247P20963 164 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 CSRP1P21291 193 aaKnown RBP16.71■□□□□ 0.27
VRK3-225ENST00000601912 FOXL2P58012 376 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 VLDLRP98155 873 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 KCNC4Q03721 635 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 SFT2D3Q587I9 215 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 C6orf15Q6UXA7 325 aaPredicted RBP16.71■□□□□ 0.27
VRK3-225ENST00000601912 FRRS1Q6ZNA5 592 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 OLIG3Q7RTU3 272 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 PEX5LQ8IYB4 626 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 C7orf34Q96L11 122 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 ZNF354BQ96LW1 612 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 C9orf16Q9BUW7 83 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 MKLN1Q9UL63 735 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 PADI1Q9ULC6 663 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 ZNF232Q9UNY5 417 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 SPAARA0A1B0GVQ0 90 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 GXYLT2A0PJZ3 443 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 CNOT3O75175 753 aaKnown RBP16.7■□□□□ 0.26
VRK3-225ENST00000601912 PRSS23O95084 383 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 PABPC4LP0CB38 370 aaKnown RBP16.7■□□□□ 0.26
VRK3-225ENST00000601912 TRHRP34981 398 aaPredicted RBP16.7■□□□□ 0.26
VRK3-225ENST00000601912 NCF4Q15080 339 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 ZNF311Q5JNZ3 666 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 C3orf38Q5JPI3 329 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 CCNJQ5T5M9 372 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 TYW3Q6IPR3 259 aaKnown RBP16.7■□□□□ 0.26
VRK3-225ENST00000601912 FAM198BQ6UWH4 519 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 IZUMO2Q6UXV1 221 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 ZBTB49Q6ZSB9 765 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 ZNF619Q8N2I2 560 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 OR1N1Q8NGS0 311 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 RMND5BQ96G75 393 aaPredicted RBP16.7■□□□□ 0.26
VRK3-225ENST00000601912 ZNF347Q96SE7 839 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 CIB1Q99828 191 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 PINK1Q9BXM7 581 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 ITPAQ9BY32 194 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 THSD1Q9NS62 852 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 SLC13A4Q9UKG4 626 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 DTX4Q9Y2E6 619 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 IFT52Q9Y366 437 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 OR10H1Q9Y4A9 318 aa16.7■□□□□ 0.26
VRK3-225ENST00000601912 SAC3D1A6NKF1 404 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 OR6C76A6NM76 312 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 KCNK2O95069 426 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 IFNW1P05000 195 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 GUSBP08236 651 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 CT45A8P0DMV1 189 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 CT45A9P0DMV2 189 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 ZNF23P17027 643 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 ATP6V1C1P21283 382 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 OR1E2P47887 323 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 DCAF7P61962 342 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 GPR68Q15743 365 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 CYP27C1Q4G0S4 372 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 CT45A2Q5DJT8 189 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 HLA-DQA1Q5Y7H0 255 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 OR2T5Q6IEZ7 315 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 FIGNL1Q6PIW4 674 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 ZNF321PQ8N8H1 164 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 GPR32P1Q8NGA4 272 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 OR2T29Q8NH02 315 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 OR52P1PQ8NH57 321 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 BTBD9Q96Q07 612 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 ZNF184Q99676 751 aaPredicted RBP16.69■□□□□ 0.26
VRK3-225ENST00000601912 G6PC3Q9BUM1 346 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 NUDT9Q9BW91 350 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 SAP130Q9H0E3 1048 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 NTN4Q9HB63 628 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 C8orf4Q9NR00 106 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 CNOT11Q9UKZ1 510 aaKnown RBP16.69■□□□□ 0.26
VRK3-225ENST00000601912 OAZ3Q9UMX2 235 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 ABCG2Q9UNQ0 655 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 GPR55Q9Y2T6 319 aaPredicted RBP16.69■□□□□ 0.26
VRK3-225ENST00000601912 FAM32AQ9Y421 112 aaKnown RBP16.69■□□□□ 0.26
VRK3-225ENST00000601912 TEX51A0A1B0GUA7 166 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 PMS2P1A4D2B8 440 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 E2F6O75461 281 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 TNFRSF1BP20333 461 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 PPICP45877 212 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 LARS2Q15031 903 aaKnown RBP16.69■□□□□ 0.26
VRK3-225ENST00000601912 TMEM205Q6UW68 189 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 NPSR1Q6W5P4 371 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 SLC29A4Q7RTT9 530 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 ASCL5Q7RTU5 278 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 CPEB2Q7Z5Q1 589 aaKnown RBP16.69■□□□□ 0.26
VRK3-225ENST00000601912 CACTIN-AS1Q8N1I8 211 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 DNAJC9Q8WXX5 260 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 TMBIM1Q969X1 311 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 SDCCAG3Q96C92 435 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 LPAR4Q99677 370 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 QRSL1Q9H0R6 528 aaKnown RBP16.69■□□□□ 0.26
VRK3-225ENST00000601912 COQ10BQ9H8M1 238 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 NDUFAF4Q9P032 175 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 CBLCQ9ULV8 474 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 SLC9A8Q9Y2E8 581 aa16.69■□□□□ 0.26
VRK3-225ENST00000601912 PTRH2Q9Y3E5 179 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms