RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 GPR55Q9Y2T6 319 aaPredicted RBP10.77□□□□□ -0.69
CHMP2A-207ENST00000600804 PCDHGB3Q9Y5G1 929 aa10.77□□□□□ -0.69
CHMP2A-207ENST00000600804 CELSR1Q9NYQ6 3014 aa10.77□□□□□ -0.69
CHMP2A-207ENST00000600804 PDZD2O15018 2839 aa10.77□□□□□ -0.69
CHMP2A-207ENST00000600804 EXPH5Q8NEV8 1989 aa10.77□□□□□ -0.69
CHMP2A-207ENST00000600804 FBN2P35556 2912 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 TRBV11-1A0A0K0K1C0 115 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 C2orf92A0A1B0GVN3 265 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 FRG2CA6NGY1 282 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 MKRN2OSH3BPM6 223 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 SORBS2O94875 1100 aaKnown RBP10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 UNC5CO95185 931 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 AK1P00568 194 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 NAGAP17050 411 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 MATN1P21941 496 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 SLC6A2P23975 617 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 COL8A1P27658 744 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 CPOXP36551 454 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 KHKP50053 298 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 NUDT2P50583 147 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 MLF1P58340 268 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 PSG6Q00889 435 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 TP53BP2Q13625 1128 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 GTDC1Q4AE62 458 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 CYP27C1Q4G0S4 372 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 PIGGQ5H8A4 983 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 ZNF787Q6DD87 383 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 DNAJC14Q6Y2X3 702 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 DND1Q8IYX4 353 aaKnown RBP10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 PGAM4Q8N0Y7 254 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 ARHGAP24Q8N264 748 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 GALNT16Q8N428 558 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 KIF2BQ8N4N8 673 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 METTL25Q8N6Q8 603 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 OR5AK3PQ8NH89 298 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 MAGED4Q96JG8 741 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 LCORQ96JN0 433 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 SLC35G5Q96KT7 338 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 KAT8Q9H7Z6 458 aaKnown RBP10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 ANKRA2Q9H9E1 313 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 ABCD2Q9UBJ2 740 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 ZNF451Q9Y4E5 1061 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 AKAP9Q99996 3911 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 ZGRF1Q86YA3 2104 aa10.76□□□□□ -0.69
CHMP2A-207ENST00000600804 A1L4Q6 167 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 ARGFXA6NJG6 315 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 PRKNO60260 465 aaPredicted RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 DNAJA2O60884 412 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 TNFRSF21O75509 655 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 AGFG2O95081 481 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 ALOX5P09917 674 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 ITGAMP11215 1152 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 LCN1P31025 176 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 TRHRP34981 398 aaPredicted RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 RASSF2P50749 326 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 PRKAG1P54619 331 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 ZNF155Q12901 538 aaPredicted RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 RGNQ15493 299 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 CRB2Q5IJ48 1285 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 IRAK1BP1Q5VVH5 260 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 HLA-DQA1Q5Y7H0 255 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 HEPHL1Q6MZM0 1159 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 C16orf89Q6UX73 402 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 NET1Q7Z628 596 aaPredicted RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 YTHDF3Q7Z739 585 aaKnown RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 SERPINA11Q86U17 422 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 RPS19BP1Q86WX3 136 aaKnown RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 RNF130Q86XS8 419 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 TAGAPQ8N103 731 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 Q8NA96 180 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 SLC16A11Q8NCK7 471 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 GALNT11Q8NCW6 608 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 CHDHQ8NE62 594 aaPredicted RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 FAM110BQ8TC76 370 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 CPT1CQ8TCG5 803 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 BRIX1Q8TDN6 353 aaKnown RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 ADAMTS15Q8TE58 950 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 DOK4Q8TEW6 326 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 SSC4DQ8WTU2 575 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 OIT3Q8WWZ8 545 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 PMM1Q92871 262 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 AURKBQ96GD4 344 aaPredicted RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 C16orf58Q96GQ5 468 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 THOC3Q96J01 351 aaKnown RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 ZNF354BQ96LW1 612 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 LMF1Q96S06 567 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 BTBD2Q9BX70 525 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 ITPAQ9BY32 194 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 SERHL2Q9H4I8 314 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 IKZF5Q9H5V7 419 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 TMEM38AQ9H6F2 299 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 TRIM45Q9H8W5 580 aaPredicted RBP10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 Q9N2J8 555 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 SPAG4Q9NPE6 437 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 TMEM181Q9P2C4 612 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 TEKT2Q9UIF3 430 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 LIPT1Q9Y234 373 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 DTX4Q9Y2E6 619 aa10.75□□□□□ -0.69
CHMP2A-207ENST00000600804 YARS2Q9Y2Z4 477 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms