RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 TYW3Q6IPR3 259 aaKnown RBP20.21■□□□□ 0.83
GRAMD1A-212ENST00000600231 PRICKLE2Q7Z3G6 844 aa20.21■□□□□ 0.83
GRAMD1A-212ENST00000600231 KIF18BQ86Y91 864 aa20.21■□□□□ 0.83
GRAMD1A-212ENST00000600231 MGLLQ99685 303 aa20.21■□□□□ 0.83
GRAMD1A-212ENST00000600231 PLA2G12AQ9BZM1 189 aa20.21■□□□□ 0.83
GRAMD1A-212ENST00000600231 MTHFD2LQ9H903 347 aaPredicted RBP20.21■□□□□ 0.83
GRAMD1A-212ENST00000600231 FAM60AQ9NP50 221 aa20.21■□□□□ 0.83
GRAMD1A-212ENST00000600231 KLHL28Q9NXS3 571 aa20.21■□□□□ 0.83
GRAMD1A-212ENST00000600231 CYR61O00622 381 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 CCNYL3P0C7X3 344 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 RGS8P57771 180 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 PUS10Q3MIT2 529 aaKnown RBP20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 LINC00299Q6ZSB3 139 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZNF367Q7RTV3 350 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 RNF167Q9H6Y7 350 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 EGLN3Q9H6Z9 239 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 IL21RQ9HBE5 538 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 HMG20AQ9NP66 347 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 PRDM9Q9NQV7 894 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 GPR27Q9NS67 375 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 C19orf53Q9UNZ5 99 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 LOC100506127A0A0U1RQW1 187 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 AGR2O95994 175 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 RPLP0P05388 317 aaKnown RBP20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 PCYT1AP49585 367 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 ST3GAL3Q11203 375 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 ITGADQ13349 1161 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 TRAM2Q15035 370 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 ARHGAP11BQ3KRB8 267 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 FHL5Q5TD97 284 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 MFSD4BQ5TF39 518 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZNF655Q8N720 491 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 OR6Q1Q8NGQ2 317 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 ABTB1Q969K4 478 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 SDF2Q99470 211 aa20.2■□□□□ 0.82
GRAMD1A-212ENST00000600231 CENPVL1A0A0U1RR11 272 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 A0A1W2PPC4 97 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 OR5K3A6NET4 321 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 GALR3O60755 368 aaPredicted RBP20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 CTSBP07858 339 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 CDK5Q00535 292 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 MLLT1Q03111 559 aaPredicted RBP20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZNF91Q05481 1191 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZNF846Q147U1 533 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 OOSP2Q86WS3 158 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 POLDIP3Q9BY77 421 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 CNIH4Q9P003 139 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 CLEC2DQ9UHP7 191 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZNF443Q9Y2A4 671 aaPredicted RBP20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 ANKRD33BA6NCL7 494 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 FAM170BA6NMN3 283 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 PFDN1O60925 122 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 DBTP11182 482 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 ST6GAL1P15907 406 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 NT5EP21589 574 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 OCLNQ16625 522 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 DEFB110Q30KQ9 67 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 MANEAQ5SRI9 462 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZNF730Q6ZMV8 503 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 NKAIN4Q8IVV8 208 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 ORAI3Q9BRQ5 295 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 FBXO8Q9NRD0 319 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 RPL36Q9Y3U8 105 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 SPACA6W5XKT8 324 aa20.19■□□□□ 0.82
GRAMD1A-212ENST00000600231 GPR75O95800 540 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 ATP1B1P05026 303 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 CHRNB1P11230 501 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 GSTM3P21266 225 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 UGT2B10P36537 528 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 GPR68Q15743 365 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 PEX5LQ8IYB4 626 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 FAM26EQ8N5C1 309 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZDHHC1Q8WTX9 485 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 KLHDC7BQ96G42 594 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 MCHR1Q99705 422 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 CCDC3Q9BQI4 270 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 CHCHD6Q9BRQ6 235 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 CENPOQ9BU64 300 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 TSSK6Q9BXA6 273 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 DSN1Q9H410 356 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 TRIM45Q9H8W5 580 aaPredicted RBP20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 B4DGG1 531 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 SGK494L7N484 410 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 AP3D1O14617 1153 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 THY1P04216 161 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 CKMT1AP12532 417 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 TUBA1BP68363 451 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 TSTQ16762 297 aaKnown RBP20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 TUBA1AQ71U36 451 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 LSRQ86X29 649 aaPredicted RBP20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 GJD3Q8N144 294 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 CA13Q8N1Q1 262 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 NR4A3Q92570 626 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 FAM46AQ96IP4 442 aaKnown RBP20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 TPSD1Q9BZJ3 242 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 PIGUQ9H490 435 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZNF232Q9UNY5 417 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 PCDHGA3Q9Y5H0 932 aa20.18■□□□□ 0.82
GRAMD1A-212ENST00000600231 ZNF12P17014 697 aa20.17■□□□□ 0.82
GRAMD1A-212ENST00000600231 LIMK1P53667 647 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms